| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812884
Identifier: 237812884
GI number: 237812884
Start: 2577279
End: 2578076
Strand: Reverse
Name: 237812884
Synonym: GBP346_A2643
Alternate gene names: NA
Gene position: 2578076-2577279 (Counterclockwise)
Preceding gene: 237812885
Following gene: 237812883
Centisome position: 62.9
GC content: 67.92
Gene sequence:
>798_bases ATGACGAACCACGACCATCGCATCGCATTCGTGCATATCCCGAGAACCGCCGGCACGACCTTCGGCGCGTATCTCGACGG GCTGTACGCGGGCCGCGACGTCGCGAAGTTCTATGCGGACGACGCGCACCCCGTCGTCAACGAGAAGCTCGATGCGTTCC GGCGGCTCGCGGCTGGCGAGAAAGCGTCGTACGCGCTGCTGCGCGGCCATTTCGTGTACGGCTTCGACGGCGGCGAGAGC GGCTGCCGCTACGTCACGCTGCTGCGCGAGCCCGTCGCGCGCCTCGTGTCGTACTACTTCTACGCGCTCAAAGAGCCGAT GAACTATCTGCACACGTATCTGCTGCAGCGGCGCATCGGGCTCGAATCATTCCTCATGAGCGACGCGAGCATCGACCTCG ACAACTATCAGGTGCGCGCGGTGTCCGGCGCGACGTTCGGCTCGTCGCGCGAGCGCGTGAGCGGCGCGCATCTGGCGCTC GCGAAGCGCAACCTCGTCGAGCGGTTCGCGGCGTTCGGGCTCACGGAGCGGTTCGATGCGTCGATGCGGCGCTTCGCGCG GCAATTCGGCTGGGCGCCCGCGCCGCGGGAGCGGCGCAACGAGGGCGCGTACGGGCGCGACGTCGAGCTTGGCGACGCAT GCCGCGCGTACGTCGAGGAAAAGAATCGGTTCGACATCGAGCTGTACCGCTTCGCGCAGGCGCACTTCGACTCTGCCGCC GCGAGCGGCGACGACGGGCGGGCGGATCGTTCGGCCGATCGCCCGGCCGACCACGCGGTTCATACGACAAGGAGCTGA
Upstream 100 bases:
>100_bases TCGCGGGCATCGGCCATTACCTGCTGCGCGATTGCCCGCACGCGCTCGCGCGCACGCTCGGCCAAGCGTGGGAAGCCGTG TCCCGCCGGAGCGTCGAGGC
Downstream 100 bases:
>100_bases CGAGATGCAAACACTGGAGATTCGGCCGCTGAGCGGGACCATCGGCGCGCAGGTGCGCAACCGCACGCTCGCCGACGTCG TCGAGAGCGGGCGCGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTNHDHRIAFVHIPRTAGTTFGAYLDGLYAGRDVAKFYADDAHPVVNEKLDAFRRLAAGEKASYALLRGHFVYGFDGGES GCRYVTLLREPVARLVSYYFYALKEPMNYLHTYLLQRRIGLESFLMSDASIDLDNYQVRAVSGATFGSSRERVSGAHLAL AKRNLVERFAAFGLTERFDASMRRFARQFGWAPAPRERRNEGAYGRDVELGDACRAYVEEKNRFDIELYRFAQAHFDSAA ASGDDGRADRSADRPADHAVHTTRS
Sequences:
>Translated_265_residues MTNHDHRIAFVHIPRTAGTTFGAYLDGLYAGRDVAKFYADDAHPVVNEKLDAFRRLAAGEKASYALLRGHFVYGFDGGES GCRYVTLLREPVARLVSYYFYALKEPMNYLHTYLLQRRIGLESFLMSDASIDLDNYQVRAVSGATFGSSRERVSGAHLAL AKRNLVERFAAFGLTERFDASMRRFARQFGWAPAPRERRNEGAYGRDVELGDACRAYVEEKNRFDIELYRFAQAHFDSAA ASGDDGRADRSADRPADHAVHTTRS >Mature_264_residues TNHDHRIAFVHIPRTAGTTFGAYLDGLYAGRDVAKFYADDAHPVVNEKLDAFRRLAAGEKASYALLRGHFVYGFDGGESG CRYVTLLREPVARLVSYYFYALKEPMNYLHTYLLQRRIGLESFLMSDASIDLDNYQVRAVSGATFGSSRERVSGAHLALA KRNLVERFAAFGLTERFDASMRRFARQFGWAPAPRERRNEGAYGRDVELGDACRAYVEEKNRFDIELYRFAQAHFDSAAA SGDDGRADRSADRPADHAVHTTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29856; Mature: 29724
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNHDHRIAFVHIPRTAGTTFGAYLDGLYAGRDVAKFYADDAHPVVNEKLDAFRRLAAGE CCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC KASYALLRGHFVYGFDGGESGCRYVTLLREPVARLVSYYFYALKEPMNYLHTYLLQRRIG CHHHHEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LESFLMSDASIDLDNYQVRAVSGATFGSSRERVSGAHLALAKRNLVERFAAFGLTERFDA HHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SMRRFARQFGWAPAPRERRNEGAYGRDVELGDACRAYVEEKNRFDIELYRFAQAHFDSAA HHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC ASGDDGRADRSADRPADHAVHTTRS CCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure TNHDHRIAFVHIPRTAGTTFGAYLDGLYAGRDVAKFYADDAHPVVNEKLDAFRRLAAGE CCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC KASYALLRGHFVYGFDGGESGCRYVTLLREPVARLVSYYFYALKEPMNYLHTYLLQRRIG CHHHHEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LESFLMSDASIDLDNYQVRAVSGATFGSSRERVSGAHLALAKRNLVERFAAFGLTERFDA HHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SMRRFARQFGWAPAPRERRNEGAYGRDVELGDACRAYVEEKNRFDIELYRFAQAHFDSAA HHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC ASGDDGRADRSADRPADHAVHTTRS CCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA