| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is gltX [H]
Identifier: 237812850
GI number: 237812850
Start: 2541760
End: 2543274
Strand: Reverse
Name: gltX [H]
Synonym: GBP346_A2609
Alternate gene names: 237812850
Gene position: 2543274-2541760 (Counterclockwise)
Preceding gene: 237812852
Following gene: 237812849
Centisome position: 62.05
GC content: 66.86
Gene sequence:
>1515_bases GTGCTCTTTCCGTTCCGGTCGCGTGCGCACCCGGCAGAGCCGTGCGGCGTGCGCCGCCGCGTCGTTTCAATTGATGCGCC GCTTGAGGCGTTCGAGCTATCGTTTATGACCCGTCCTGTACGCACCCGTTTTGCGCCGAGCCCCACCGGCTTCATCCATC TCGGCAACATCCGATCCGCGCTCTATCCGTGGGCGTTCGCCCGCAAGATGAAGGGCACGTTCGTGCTGCGGATCGAGGAT ACGGATCTCGAGCGCTCGACCGAGGCGTCGGTCGATGCGATCCTCGAAGGGATGGCATGGCTCGGGCTCGACTACGACGA AGGCCCGTACTACCAGATGCAGCGGATGGACCGCTATCGCGAGGTGCTCGCGCAGATGCTCGAGAAAGACCTCGTCTACC CGTGCTACATGTCGACCGAAGAACTCGATGCGTTGCGCGAGCGCCAGCGCGCGGCGGGCGAGAAGCCGCGCTACGATGGC ACGTGGCGCCCCGAGCCGGGCAAGGTGCTGCCCGAGCCGCCGGCGGGCGTGACCCCCGTGCTGCGCTTTCGCAATCCGCT GACGGGGTCGGTCGTCTGGGACGACGCCGTGAAGGGCCGCGTCGAGATCTCGAACGAGGAGCTCGACGATCTCGTCATCG CGCGCCCCGACGGCACGCCGACGTACAACTTCTGCGTCGTCGTCGACGATCTCGACATGGGCATCACGCACGTGATCCGC GGGGACGACCATGTGAACAATACGCCGCGCCAGATCAACATCCTGCGCGCGCTCGGCGGCGAAGTGCCGGTGTACGCGCA TCTGCCGACCGTGCTCAACGAGCAGGGCGAGAAGATGAGCAAGCGCCACGGCGCGATGAGCGTGATGGGCTACCGCGATG CCGGCTATCTGCCGGAGGCGGTGCTCAACTATCTCGCGCGTCTCGGCTGGTCGCACGGCGACGCGGAGATCTTCTCGCGC GAGCAGTTCGTCGAATGGTTCGATCTCGAGCATCTCGGCAAGTCGCCCGCGCAGTACGATCACAACAAGCTGAACTGGCT GAACAACCACTACATCAAGGAAGCGGACGACGCGCGCCTGGCCGAGCTGGCAAAGCCGTTCTTCGCGGCGCTCGGCATCG ACGCCGACACGATCGCGCGGGGCCCGGACCTCGTGGGCGTGATGGGGCTGATGAAGGATCGCGCGTCGACGGTGAAGGAG ATCGCGGAGAATTCGACGATGTTCTACCGTTCGCCCGCCCCGGATGCGCAAGCGCTCGCGCAGCACGTGACCGACGCGGT GCGCCCGGCGCTCGCCGAGTTTGCCGCGGCGCTGAAGACGGCCGAGTGGACGAAGGAGGCGATCGCGGCCGCGCTGAAGG CCGTGCTCGGCGCGCACAAGCTGAAGATGCCGCAGCTTGCGATGCCGGTGCGCCTGCTCGTCGCGGGCACGACGCATACG CCGTCGATCGACGCGGTGCTGCTGCTGTTCGGCCGCGACGTCGTCGTGTCGCGCCTCGCGTCGGCGCTCGCATAG
Upstream 100 bases:
>100_bases GGGGGCGGGAGGACGGGGGGGCGAGCGACGAGACACGCCGCGCCTGGTCGCGCAGCCGGGCGCGACGCGACGAGGAACCG CGGCGCGACGAGTATAATTC
Downstream 100 bases:
>100_bases GCGCGCGGGGCGTCCGGGAAGCCGTGCGGTTGAGGCAACGAACCGAGGCAACGCACGCGTCGAACGCACGGCTTCCAAAA ATTTTGCGCGAAACGCAAAT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MLFPFRSRAHPAEPCGVRRRVVSIDAPLEAFELSFMTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIED TDLERSTEASVDAILEGMAWLGLDYDEGPYYQMQRMDRYREVLAQMLEKDLVYPCYMSTEELDALRERQRAAGEKPRYDG TWRPEPGKVLPEPPAGVTPVLRFRNPLTGSVVWDDAVKGRVEISNEELDDLVIARPDGTPTYNFCVVVDDLDMGITHVIR GDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQGEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFSR EQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEADDARLAELAKPFFAALGIDADTIARGPDLVGVMGLMKDRASTVKE IAENSTMFYRSPAPDAQALAQHVTDAVRPALAEFAAALKTAEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHT PSIDAVLLLFGRDVVVSRLASALA
Sequences:
>Translated_504_residues MLFPFRSRAHPAEPCGVRRRVVSIDAPLEAFELSFMTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIED TDLERSTEASVDAILEGMAWLGLDYDEGPYYQMQRMDRYREVLAQMLEKDLVYPCYMSTEELDALRERQRAAGEKPRYDG TWRPEPGKVLPEPPAGVTPVLRFRNPLTGSVVWDDAVKGRVEISNEELDDLVIARPDGTPTYNFCVVVDDLDMGITHVIR GDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQGEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFSR EQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEADDARLAELAKPFFAALGIDADTIARGPDLVGVMGLMKDRASTVKE IAENSTMFYRSPAPDAQALAQHVTDAVRPALAEFAAALKTAEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHT PSIDAVLLLFGRDVVVSRLASALA >Mature_504_residues MLFPFRSRAHPAEPCGVRRRVVSIDAPLEAFELSFMTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIED TDLERSTEASVDAILEGMAWLGLDYDEGPYYQMQRMDRYREVLAQMLEKDLVYPCYMSTEELDALRERQRAAGEKPRYDG TWRPEPGKVLPEPPAGVTPVLRFRNPLTGSVVWDDAVKGRVEISNEELDDLVIARPDGTPTYNFCVVVDDLDMGITHVIR GDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQGEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFSR EQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEADDARLAELAKPFFAALGIDADTIARGPDLVGVMGLMKDRASTVKE IAENSTMFYRSPAPDAQALAQHVTDAVRPALAEFAAALKTAEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHT PSIDAVLLLFGRDVVVSRLASALA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=330, Percent_Identity=35.1515151515151, Blast_Score=195, Evalue=8e-50, Organism=Escherichia coli, GI1788743, Length=466, Percent_Identity=49.5708154506438, Blast_Score=464, Evalue=1e-132, Organism=Escherichia coli, GI226510925, Length=245, Percent_Identity=37.1428571428571, Blast_Score=140, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71993394, Length=475, Percent_Identity=29.0526315789474, Blast_Score=182, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6324540, Length=332, Percent_Identity=36.144578313253, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6321192, Length=233, Percent_Identity=26.6094420600858, Blast_Score=73, Evalue=9e-14, Organism=Drosophila melanogaster, GI24665321, Length=498, Percent_Identity=28.9156626506024, Blast_Score=215, Evalue=5e-56,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 56194; Mature: 56194
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFPFRSRAHPAEPCGVRRRVVSIDAPLEAFELSFMTRPVRTRFAPSPTGFIHLGNIRSA CCCCCCCCCCCCCCCCHHEEEEEECCCHHHHHHHHHHCCHHHCCCCCCCCEEEECCHHHH LYPWAFARKMKGTFVLRIEDTDLERSTEASVDAILEGMAWLGLDYDEGPYYQMQRMDRYR HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH EVLAQMLEKDLVYPCYMSTEELDALRERQRAAGEKPRYDGTWRPEPGKVLPEPPAGVTPV HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH LRFRNPLTGSVVWDDAVKGRVEISNEELDDLVIARPDGTPTYNFCVVVDDLDMGITHVIR HHHCCCCCCCEEECCCCCCEEEECCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCEEEC GDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQGEKMSKRHGAMSVMGYRDAGYLPEA CCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH VLNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEADDARL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHH AELAKPFFAALGIDADTIARGPDLVGVMGLMKDRASTVKEIAENSTMFYRSPAPDAQALA HHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH QHVTDAVRPALAEFAAALKTAEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCC PSIDAVLLLFGRDVVVSRLASALA CCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLFPFRSRAHPAEPCGVRRRVVSIDAPLEAFELSFMTRPVRTRFAPSPTGFIHLGNIRSA CCCCCCCCCCCCCCCCHHEEEEEECCCHHHHHHHHHHCCHHHCCCCCCCCEEEECCHHHH LYPWAFARKMKGTFVLRIEDTDLERSTEASVDAILEGMAWLGLDYDEGPYYQMQRMDRYR HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH EVLAQMLEKDLVYPCYMSTEELDALRERQRAAGEKPRYDGTWRPEPGKVLPEPPAGVTPV HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH LRFRNPLTGSVVWDDAVKGRVEISNEELDDLVIARPDGTPTYNFCVVVDDLDMGITHVIR HHHCCCCCCCEEECCCCCCEEEECCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCEEEC GDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQGEKMSKRHGAMSVMGYRDAGYLPEA CCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH VLNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEADDARL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHH AELAKPFFAALGIDADTIARGPDLVGVMGLMKDRASTVKEIAENSTMFYRSPAPDAQALA HHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH QHVTDAVRPALAEFAAALKTAEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCC PSIDAVLLLFGRDVVVSRLASALA CCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA