| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812837
Identifier: 237812837
GI number: 237812837
Start: 2528693
End: 2528962
Strand: Direct
Name: 237812837
Synonym: GBP346_A2591
Alternate gene names: NA
Gene position: 2528693-2528962 (Clockwise)
Preceding gene: 237812832
Following gene: 237812838
Centisome position: 61.7
GC content: 62.59
Gene sequence:
>270_bases ATGAGCGACATCACCGCCCAATTCGAGCAAGCGCAGATCGACGTGAAGCAACTGACCGAGCGTCCCGGCAACCTGACGCT GCTGCGCCTGTACGCGCTCTTCAAGCAGGCGACCGACGGCGACGTGCACGGCGACAAGCCGGGCTTCACCGACATCGTCG GCAAGTACAAGTACGACGCGTGGGACGCGCTGAAGGGCACGTCGCAAGACGACGCGAAGAAGCAATACGTCGAGCTCGTC GAATCGCTGAAGAACGGCACCGCCTCCTGA
Upstream 100 bases:
>100_bases GCGAATCGGTTTGGAAGGAACGCTCGACCCGCCGCCCGCCCCCGCTTGCTAAGATCGTCGGCCTGGAAAAGCCAGCCTGG AAACCCTGACGGAGACACCC
Downstream 100 bases:
>100_bases CGGCGGCGCGCGCGTCGGCCGGCCCCGCGCCGGCCCCGCGCCGGCCGCGTGCGGGCACCGGCGCGCGCCGCGCCACCGCG GCGCGCCCTTCGCCGCGCGC
Product: acyl-CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSDITAQFEQAQIDVKQLTERPGNLTLLRLYALFKQATDGDVHGDKPGFTDIVGKYKYDAWDALKGTSQDDAKKQYVELV ESLKNGTAS
Sequences:
>Translated_89_residues MSDITAQFEQAQIDVKQLTERPGNLTLLRLYALFKQATDGDVHGDKPGFTDIVGKYKYDAWDALKGTSQDDAKKQYVELV ESLKNGTAS >Mature_88_residues SDITAQFEQAQIDVKQLTERPGNLTLLRLYALFKQATDGDVHGDKPGFTDIVGKYKYDAWDALKGTSQDDAKKQYVELVE SLKNGTAS
Specific function: Unknown
COG id: COG4281
COG function: function code I; Acyl-CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI120433590, Length=79, Percent_Identity=46.8354430379747, Blast_Score=82, Evalue=9e-17, Organism=Homo sapiens, GI120433593, Length=79, Percent_Identity=46.8354430379747, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI295842534, Length=70, Percent_Identity=47.1428571428571, Blast_Score=74, Evalue=2e-14, Organism=Homo sapiens, GI295842514, Length=70, Percent_Identity=47.1428571428571, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI295849266, Length=70, Percent_Identity=47.1428571428571, Blast_Score=73, Evalue=4e-14, Organism=Homo sapiens, GI295849279, Length=70, Percent_Identity=47.1428571428571, Blast_Score=73, Evalue=4e-14, Organism=Homo sapiens, GI10140853, Length=70, Percent_Identity=47.1428571428571, Blast_Score=73, Evalue=4e-14, Organism=Homo sapiens, GI260274832, Length=71, Percent_Identity=45.0704225352113, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI45643119, Length=71, Percent_Identity=45.0704225352113, Blast_Score=68, Evalue=2e-12, Organism=Homo sapiens, GI260275230, Length=71, Percent_Identity=45.0704225352113, Blast_Score=68, Evalue=2e-12, Organism=Homo sapiens, GI89886362, Length=82, Percent_Identity=41.4634146341463, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17535521, Length=84, Percent_Identity=53.5714285714286, Blast_Score=92, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17506027, Length=80, Percent_Identity=53.75, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI32566407, Length=61, Percent_Identity=42.6229508196721, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6321474, Length=80, Percent_Identity=45, Blast_Score=76, Evalue=9e-16, Organism=Drosophila melanogaster, GI24582714, Length=83, Percent_Identity=49.3975903614458, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI24659809, Length=80, Percent_Identity=46.25, Blast_Score=75, Evalue=6e-15, Organism=Drosophila melanogaster, GI24659814, Length=80, Percent_Identity=46.25, Blast_Score=75, Evalue=6e-15, Organism=Drosophila melanogaster, GI21357027, Length=74, Percent_Identity=47.2972972972973, Blast_Score=70, Evalue=2e-13, Organism=Drosophila melanogaster, GI24659804, Length=74, Percent_Identity=43.2432432432432, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI281365751, Length=74, Percent_Identity=43.2432432432432, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9897; Mature: 9766
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDITAQFEQAQIDVKQLTERPGNLTLLRLYALFKQATDGDVHGDKPGFTDIVGKYKYDA CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCH WDALKGTSQDDAKKQYVELVESLKNGTAS HHHHCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDITAQFEQAQIDVKQLTERPGNLTLLRLYALFKQATDGDVHGDKPGFTDIVGKYKYDA CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCH WDALKGTSQDDAKKQYVELVESLKNGTAS HHHHCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA