| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yeaZ [H]
Identifier: 237812836
GI number: 237812836
Start: 2527762
End: 2528511
Strand: Reverse
Name: yeaZ [H]
Synonym: GBP346_A2590
Alternate gene names: 237812836
Gene position: 2528511-2527762 (Counterclockwise)
Preceding gene: 237812841
Following gene: 237812835
Centisome position: 61.69
GC content: 77.07
Gene sequence:
>750_bases GTGCTCCTCGCCATCGATACGTCGACCGAGTTCTGCTCGGTCGCGCTGCTCGCCGCGGACGGCCCGACGGCCGACGCCGC TTCCTTCCGAACCTGGGTCCGCCACGAGCGCACGGGCGCCGTGTCGAGCACGCGCGTGCTGCCCGCCGTGCGCGAGGTGC TCGACGAAGCGGGCCTCGCGTTCGCCGATTGCAATGCGATCGCGTTCGGCGCGGGGCCCGGCTCGTTTACCGGGCTGCGC ACCGCCACCGGCGTTGCGCAAGGGCTCGCGTTCGGCCGCGCGCTGCCTGTCGTGCCGGTCGGCACGCTCCTCGCGTGCGC CGAAGCCGCGCGCCTGAACGCGGGCGCCGCCGCCGGCCGCGCGACGCGCGTGCTCGCCGCGCTCGATGCGCGCATGGACG AGGTCTATTGGGCCGACTACGCGTGGGACGACGCGGCGGGCGACTGGCAGGCGCTCGTGCCCGCGTCGCTCGCGGCGCCC GCCGACGTGCGGGCGCCCGATGCGCCGTTCGTGCTCGCCGGCAACGCGGCGGCCGTGTTCGGCGAGCGTCTGCCCGCCTG CGCGCGCGCGCGGGCGATCGACGCGAACGCGCTGCCGCATGCGCTGCCGATCGCGCACGTCGCGCTGCGCGCATATCGCG CGGGACGCGCCGTGCCGGCCGATCGCGCGGCGCCCGAGTACGTGCGCGACAAGGTCGCGCAGACCACCGCCGAGCGGCTC GCCGCGCGCGCGGACGGAGGCGGCCGATGA
Upstream 100 bases:
>100_bases TCCTTCCAAACCGATTCGCGCCCGGCGCACGCGCGCGAATCGGAGCCGATCGCCCGTGCGGGCGGGGCGCCGCATTACAA TGTCGGCCATGACGCAAACA
Downstream 100 bases:
>100_bases GCGGCGTGCTGATGACCGATCGCTATCTGGCACCGATGACGGACGCCGATCTCGACGAGGTCGTCGAGATCGAGCGCGCC GCGTACGAATTTCCGTGGTC
Product: glycoprotease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLLAIDTSTEFCSVALLAADGPTADAASFRTWVRHERTGAVSSTRVLPAVREVLDEAGLAFADCNAIAFGAGPGSFTGLR TATGVAQGLAFGRALPVVPVGTLLACAEAARLNAGAAAGRATRVLAALDARMDEVYWADYAWDDAAGDWQALVPASLAAP ADVRAPDAPFVLAGNAAAVFGERLPACARARAIDANALPHALPIAHVALRAYRAGRAVPADRAAPEYVRDKVAQTTAERL AARADGGGR
Sequences:
>Translated_249_residues MLLAIDTSTEFCSVALLAADGPTADAASFRTWVRHERTGAVSSTRVLPAVREVLDEAGLAFADCNAIAFGAGPGSFTGLR TATGVAQGLAFGRALPVVPVGTLLACAEAARLNAGAAAGRATRVLAALDARMDEVYWADYAWDDAAGDWQALVPASLAAP ADVRAPDAPFVLAGNAAAVFGERLPACARARAIDANALPHALPIAHVALRAYRAGRAVPADRAAPEYVRDKVAQTTAERL AARADGGGR >Mature_249_residues MLLAIDTSTEFCSVALLAADGPTADAASFRTWVRHERTGAVSSTRVLPAVREVLDEAGLAFADCNAIAFGAGPGSFTGLR TATGVAQGLAFGRALPVVPVGTLLACAEAARLNAGAAAGRATRVLAALDARMDEVYWADYAWDDAAGDWQALVPASLAAP ADVRAPDAPFVLAGNAAAVFGERLPACARARAIDANALPHALPIAHVALRAYRAGRAVPADRAAPEYVRDKVAQTTAERL AARADGGGR
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=236, Percent_Identity=36.864406779661, Blast_Score=127, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 25513; Mature: 25513
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAIDTSTEFCSVALLAADGPTADAASFRTWVRHERTGAVSSTRVLPAVREVLDEAGLA CEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCE FADCNAIAFGAGPGSFTGLRTATGVAQGLAFGRALPVVPVGTLLACAEAARLNAGAAAGR EECCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH ATRVLAALDARMDEVYWADYAWDDAAGDWQALVPASLAAPADVRAPDAPFVLAGNAAAVF HHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCEEEECCHHHHH GERLPACARARAIDANALPHALPIAHVALRAYRAGRAVPADRAAPEYVRDKVAQTTAERL HHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AARADGGGR HHHCCCCCC >Mature Secondary Structure MLLAIDTSTEFCSVALLAADGPTADAASFRTWVRHERTGAVSSTRVLPAVREVLDEAGLA CEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCE FADCNAIAFGAGPGSFTGLRTATGVAQGLAFGRALPVVPVGTLLACAEAARLNAGAAAGR EECCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH ATRVLAALDARMDEVYWADYAWDDAAGDWQALVPASLAAPADVRAPDAPFVLAGNAAAVF HHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCEEEECCHHHHH GERLPACARARAIDANALPHALPIAHVALRAYRAGRAVPADRAAPEYVRDKVAQTTAERL HHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AARADGGGR HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]