| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812816
Identifier: 237812816
GI number: 237812816
Start: 2503805
End: 2505076
Strand: Reverse
Name: 237812816
Synonym: GBP346_A2569
Alternate gene names: NA
Gene position: 2505076-2503805 (Counterclockwise)
Preceding gene: 237812817
Following gene: 237812814
Centisome position: 61.12
GC content: 72.09
Gene sequence:
>1272_bases ATGGACGAGTTGACACTCGGGTTGATCGGCGCGGGCGCCGTCGTGGTGGGCGGCGTCGTGGTCTACAACGCGTGGCAGGG CGCGAAGGTGCGCCGCAGGATGCCGCGCCCGATGCCGAGCGAGGCGGAGGCCGCCGCACGGCACGAGCGCGAAGACGACG CGCCTTTCATCGAGCCGGTGCGCCAGCCGGTGCGCCGCGACGCGGCGGCGGGCGCCGCGTCGGCGGGCGCGGCGGGCGGC GATGCGGTGCGCGTCGAGCCGACGTTCGGCGGCGGCGCGGCGCCCGCCGATACGCCGGCCGATCTTCAGGCCGAGGCGAG CGTCGCGAACGGCGCGCTCGAGCCGGCCGCCGAGGCCGCGCATGGCGGCGAAGCGGCCGTCGCGGCCGATGCCGCGCGCG ACGAGCCGCTCGAGCCGGTGCTGCCCGCCGCGACGACGATTTCCGCGGCGCCGCCGGCGGTCGTCGATCGCCGGATCGAC TGCATCGTGCCGATCCGCCTCGCGAGCCCGCTCGCGGGCGACAAGATCCTGCCCGCCGCGCAGCGGCTGCGCCGCGCGGG CAGCAAGCCGGTGCACATCGAGGGCAAGCCCGACGGCGGCGATGCATGGGAGCTGCTGCAAAACGGCGTGCGCTACGACG AGCTGCGCGCGGCCGCGCAGCTCGCGAACCGCAGCGGCCCGCTCAACGAGCTCGAGTTCTCCGAGTTCGTGACGGGCGTG CAGCAGTTCGCGGACGCGATCGACGGCGCGCCGGAGTTCCCGGACATGATGGAAACGGTATCGATGGCGCGCGAGCTCGA CGGCTTCGCCGCCCAATGCGACGCGCAACTGTCGATCAACGTGATGTCGGACGGCGCGCCGTGGTCGGCCAATTACGTGC AGGCGGTCGCGTCGCAGGACGGGCTGCTGCTGTCGCGCGACGGCACGCGCTTCGTGAAGCTCGACGCGAAGCAGAACCCC GTCTTCATGCTGCAGTTCGGCGATACGAACTTCCTGCGCGACGATCTCACGTACAAGGGCGGCAACCTGATCACGCTCGT GCTCGACGTGCCGGTGGCCGACGAGGACATCCTGCCGTTCCGGCTGATGTGCGATTACGCGAAATCGCTGTCCGAGCGCA TCGGCGCACGCGTCGTCGACGATCAGCGCCGGCCGCTGCCCGAATCGACGCTGCTCGCGATCGAGCAGCAACTGATGAAG CTGTACGCGCGGCTCGAGGAGGCCGGCATTCCGGCCGGCTCGCCCGTCACGCGACGGCTGTTCAGTCAGTAG
Upstream 100 bases:
>100_bases GGGTTTTGCCCAGAATTGACGTATGACGAATGGCACGCGGGCGCGCGGCGCATCGGCGCCCGTCCGCGAGTCCGATGACA CGGAATTGGATGGAGCTTGC
Downstream 100 bases:
>100_bases GCGCCGCCGGGCGCGCGGGTTTCGCCGCGGCGCGGCCTTGCCCGAACGTGCGCGGGCAGCGGCTTGCGCTTGCGTTGCCG CGCCGCATCATCCGGACCGC
Product: ZipA FtsZ-binding region
Products: NA
Alternate protein names: Protein ZipA; Transmembrane Protein; ZipA Related Protein Possibly Involved In; Chromosome Segregation Protein Smc
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPSEAEAAARHEREDDAPFIEPVRQPVRRDAAAGAASAGAAGG DAVRVEPTFGGGAAPADTPADLQAEASVANGALEPAAEAAHGGEAAVAADAARDEPLEPVLPAATTISAAPPAVVDRRID CIVPIRLASPLAGDKILPAAQRLRRAGSKPVHIEGKPDGGDAWELLQNGVRYDELRAAAQLANRSGPLNELEFSEFVTGV QQFADAIDGAPEFPDMMETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLDAKQNP VFMLQFGDTNFLRDDLTYKGGNLITLVLDVPVADEDILPFRLMCDYAKSLSERIGARVVDDQRRPLPESTLLAIEQQLMK LYARLEEAGIPAGSPVTRRLFSQ
Sequences:
>Translated_423_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPSEAEAAARHEREDDAPFIEPVRQPVRRDAAAGAASAGAAGG DAVRVEPTFGGGAAPADTPADLQAEASVANGALEPAAEAAHGGEAAVAADAARDEPLEPVLPAATTISAAPPAVVDRRID CIVPIRLASPLAGDKILPAAQRLRRAGSKPVHIEGKPDGGDAWELLQNGVRYDELRAAAQLANRSGPLNELEFSEFVTGV QQFADAIDGAPEFPDMMETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLDAKQNP VFMLQFGDTNFLRDDLTYKGGNLITLVLDVPVADEDILPFRLMCDYAKSLSERIGARVVDDQRRPLPESTLLAIEQQLMK LYARLEEAGIPAGSPVTRRLFSQ >Mature_423_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPSEAEAAARHEREDDAPFIEPVRQPVRRDAAAGAASAGAAGG DAVRVEPTFGGGAAPADTPADLQAEASVANGALEPAAEAAHGGEAAVAADAARDEPLEPVLPAATTISAAPPAVVDRRID CIVPIRLASPLAGDKILPAAQRLRRAGSKPVHIEGKPDGGDAWELLQNGVRYDELRAAAQLANRSGPLNELEFSEFVTGV QQFADAIDGAPEFPDMMETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLDAKQNP VFMLQFGDTNFLRDDLTYKGGNLITLVLDVPVADEDILPFRLMCDYAKSLSERIGARVVDDQRRPLPESTLLAIEQQLMK LYARLEEAGIPAGSPVTRRLFSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44848; Mature: 44848
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPSEAEAAARHEREDDAPFIEPV CCCCEEEECCCCHHHHCCEEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHH RQPVRRDAAAGAASAGAAGGDAVRVEPTFGGGAAPADTPADLQAEASVANGALEPAAEAA HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHC HGGEAAVAADAARDEPLEPVLPAATTISAAPPAVVDRRIDCIVPIRLASPLAGDKILPAA CCCCCEEECCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCCEEEEEHHCCCCCCCCCCHHH QRLRRAGSKPVHIEGKPDGGDAWELLQNGVRYDELRAAAQLANRSGPLNELEFSEFVTGV HHHHHCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QQFADAIDGAPEFPDMMETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQD HHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCC GLLLSRDGTRFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNLITLVLDVPVADEDILPF CEEEECCCCEEEEEECCCCCEEEEEECCCCHHHCCCEECCCCEEEEEEECCCCCCCCCHH RLMCDYAKSLSERIGARVVDDQRRPLPESTLLAIEQQLMKLYARLEEAGIPAGSPVTRRL HHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH FSQ HCC >Mature Secondary Structure MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPSEAEAAARHEREDDAPFIEPV CCCCEEEECCCCHHHHCCEEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHH RQPVRRDAAAGAASAGAAGGDAVRVEPTFGGGAAPADTPADLQAEASVANGALEPAAEAA HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHC HGGEAAVAADAARDEPLEPVLPAATTISAAPPAVVDRRIDCIVPIRLASPLAGDKILPAA CCCCCEEECCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCCEEEEEHHCCCCCCCCCCHHH QRLRRAGSKPVHIEGKPDGGDAWELLQNGVRYDELRAAAQLANRSGPLNELEFSEFVTGV HHHHHCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QQFADAIDGAPEFPDMMETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQD HHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCC GLLLSRDGTRFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNLITLVLDVPVADEDILPF CEEEECCCCEEEEEECCCCCEEEEEECCCCHHHCCCEECCCCEEEEEEECCCCCCCCCHH RLMCDYAKSLSERIGARVVDDQRRPLPESTLLAIEQQLMKLYARLEEAGIPAGSPVTRRL HHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH FSQ HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA