| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237812815
Identifier: 237812815
GI number: 237812815
Start: 2503453
End: 2503815
Strand: Direct
Name: 237812815
Synonym: GBP346_A2570
Alternate gene names: NA
Gene position: 2503453-2503815 (Clockwise)
Preceding gene: 237812812
Following gene: 237812819
Centisome position: 61.08
GC content: 77.69
Gene sequence:
>363_bases GTGGAAATCGCGGGCGATCGGGCATTCGGCGCGGCCATCGCGGCCCGCGGCTTTCGTCGCGGCGCGCCGGCCTGCCGGCA CCGCGCGCGGACCCGCGCAACCGGCGCGGCGACGATACGGGACACGCCGGGCAACCGGCGCGCGCCGGCGGCCGCGATCG CTCCGCGCGGCGCGGCGCACGTTGCGAAACGCATCGTGCGCCGCACGATGACCACCGAAACGAAACGCCCGGCGTTCGAG CCGCCGCGCGCGGCGGTCCGGATGATGCGGCGCGGCAACGCAAGCGCAAGCCGCTGCCCGCGCACGTTCGGGCAAGGCCG CGCCGCGGCGAAACCCGCGCGCCCGGCGGCGCCTACTGACTGA
Upstream 100 bases:
>100_bases GGGATCGGGCCATGCTGGCGGCACTTTCTCGTGAGGATAATCAGGCGACGATTATCTCAGTTCGAGCCCTTTTCGGCATC GGCTGAATGGCCGCTCGAGC
Downstream 100 bases:
>100_bases ACAGCCGTCGCGTGACGGGCGAGCCGGCCGGAATGCCGGCCTCCTCGAGCCGCGCGTACAGCTTCATCAGTTGCTGCTCG ATCGCGAGCAGCGTCGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MEIAGDRAFGAAIAARGFRRGAPACRHRARTRATGAATIRDTPGNRRAPAAAIAPRGAAHVAKRIVRRTMTTETKRPAFE PPRAAVRMMRRGNASASRCPRTFGQGRAAAKPARPAAPTD
Sequences:
>Translated_120_residues MEIAGDRAFGAAIAARGFRRGAPACRHRARTRATGAATIRDTPGNRRAPAAAIAPRGAAHVAKRIVRRTMTTETKRPAFE PPRAAVRMMRRGNASASRCPRTFGQGRAAAKPARPAAPTD >Mature_120_residues MEIAGDRAFGAAIAARGFRRGAPACRHRARTRATGAATIRDTPGNRRAPAAAIAPRGAAHVAKRIVRRTMTTETKRPAFE PPRAAVRMMRRGNASASRCPRTFGQGRAAAKPARPAAPTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12725; Mature: 12725
Theoretical pI: Translated: 12.72; Mature: 12.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIAGDRAFGAAIAARGFRRGAPACRHRARTRATGAATIRDTPGNRRAPAAAIAPRGAAH CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHCCCCHHH VAKRIVRRTMTTETKRPAFEPPRAAVRMMRRGNASASRCPRTFGQGRAAAKPARPAAPTD HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEIAGDRAFGAAIAARGFRRGAPACRHRARTRATGAATIRDTPGNRRAPAAAIAPRGAAH CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHCCCCHHH VAKRIVRRTMTTETKRPAFEPPRAAVRMMRRGNASASRCPRTFGQGRAAAKPARPAAPTD HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA