Click here to switch to the map view.

The map label for this gene is ytfF [H]

Identifier: 237812779

GI number: 237812779

Start: 2467197

End: 2468165

Strand: Direct

Name: ytfF [H]

Synonym: GBP346_A2533

Alternate gene names: 237812779

Gene position: 2467197-2468165 (Clockwise)

Preceding gene: 237812778

Following gene: 237812782

Centisome position: 60.2

GC content: 70.07

Gene sequence:

>969_bases
ATGCAGCGGGGTGTGGTGTACGGCGTCTTGGCGGGCGCCTTGTGGGGAATGGTGTTTCTCGTGCCGCGGCTCCTGACCGA
TTTCTCGCCGCTGCTGCTGAGCGTCGGCCGCTACGCGATGTACGGCCTCGTGTCGCTCGCGGCCGCGCTGCCGGCCGCCC
GCTCGCTCGCCTCGCGTCTCACGCACGACGATCTCGTCGCGCTCGTCAGGCTCGCGCTCGTCGGCAACGTCGCGTACTAC
ATGCTGCTGTCGAGCGCCGTGCATTTGATCGGCATCGCGCCCAGCTCGCTGATCGTCGGCGTGCTGCCCGTCACCGTCAC
GCTCGCCGGCCTGGGCGACCACGGCGCGGTGCCGCTCAAGCGGCTCGCGGGGCCGCTCGCGCTCGTCGTCGCCGGCATCG
CGTGCATCAACGTCGATCTGTTCACGTCGGAAGCCGCCCACGCGACGACGCTCGCGCAAAAACTCGCCGGCATCGCCTGC
GCGACGGGCGCGCTCGCGAGCTGGACGTGGTATGCGGTCGCGAACGCCCGCTATCTGCAACGCCACCATCATTTCGACGG
CAACGAATGGTCGGTGCTGTGGGGCGTCGTCACCGGCCTGATTGGCGGGCTGTGCTGGATCGGGATCGCCGCGCTGCCGG
CCGGCGCGCTGCAGCCGGCGCTGCCCGCGTCGCGCTGGCAGCTGTTCTGGCTGCTGAATCTCGGCCTCGCGATCGGCGCG
TCGTGGCTCGGCAACGGGCTGTGGAACGCGGCGTCGAAGCGGCTGCCGCTCACGCTGTCGGGCCAGTTGATCGTGTTCGA
AACCGTTTTCGCGCTGCTATACGGCTTCGTCTTCGATCATCGGCTGCCGCGCGTGCTCGAGATCGCGGCGCTCGTGCTGC
TGCTCGCCGGCGTCTACGGCTCGGTACGCCGGCACGGCGACAAGCGCGCGGCCGACGATCCGCTCAACGCGAACCTCGGC
GCGCACTGA

Upstream 100 bases:

>100_bases
CATCGACCAAGCGCAGGGCCGAATGCAGGAATGAACAAGACGAACACCGCGCGGCACCGCTAAGATGCGCGCTCGTCAGT
GAAAATGGTCGGAGAATTCG

Downstream 100 bases:

>100_bases
GCGCGGGCGCCGCCCGCGCATTGGCGCGGAGGTTGGGTCGGCCGTTCAGCCGCTCGGCCGCCGGCCGCTTCGGCAGCGAC
GCGCGGGCCGATTGCGTCCG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MQRGVVYGVLAGALWGMVFLVPRLLTDFSPLLLSVGRYAMYGLVSLAAALPAARSLASRLTHDDLVALVRLALVGNVAYY
MLLSSAVHLIGIAPSSLIVGVLPVTVTLAGLGDHGAVPLKRLAGPLALVVAGIACINVDLFTSEAAHATTLAQKLAGIAC
ATGALASWTWYAVANARYLQRHHHFDGNEWSVLWGVVTGLIGGLCWIGIAALPAGALQPALPASRWQLFWLLNLGLAIGA
SWLGNGLWNAASKRLPLTLSGQLIVFETVFALLYGFVFDHRLPRVLEIAALVLLLAGVYGSVRRHGDKRAADDPLNANLG
AH

Sequences:

>Translated_322_residues
MQRGVVYGVLAGALWGMVFLVPRLLTDFSPLLLSVGRYAMYGLVSLAAALPAARSLASRLTHDDLVALVRLALVGNVAYY
MLLSSAVHLIGIAPSSLIVGVLPVTVTLAGLGDHGAVPLKRLAGPLALVVAGIACINVDLFTSEAAHATTLAQKLAGIAC
ATGALASWTWYAVANARYLQRHHHFDGNEWSVLWGVVTGLIGGLCWIGIAALPAGALQPALPASRWQLFWLLNLGLAIGA
SWLGNGLWNAASKRLPLTLSGQLIVFETVFALLYGFVFDHRLPRVLEIAALVLLLAGVYGSVRRHGDKRAADDPLNANLG
AH
>Mature_322_residues
MQRGVVYGVLAGALWGMVFLVPRLLTDFSPLLLSVGRYAMYGLVSLAAALPAARSLASRLTHDDLVALVRLALVGNVAYY
MLLSSAVHLIGIAPSSLIVGVLPVTVTLAGLGDHGAVPLKRLAGPLALVVAGIACINVDLFTSEAAHATTLAQKLAGIAC
ATGALASWTWYAVANARYLQRHHHFDGNEWSVLWGVVTGLIGGLCWIGIAALPAGALQPALPASRWQLFWLLNLGLAIGA
SWLGNGLWNAASKRLPLTLSGQLIVFETVFALLYGFVFDHRLPRVLEIAALVLLLAGVYGSVRRHGDKRAADDPLNANLG
AH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=330, Percent_Identity=31.8181818181818, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33967; Mature: 33967

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]