Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812777

Identifier: 237812777

GI number: 237812777

Start: 2464927

End: 2466147

Strand: Direct

Name: 237812777

Synonym: GBP346_A2531

Alternate gene names: NA

Gene position: 2464927-2466147 (Clockwise)

Preceding gene: 237812770

Following gene: 237812778

Centisome position: 60.14

GC content: 77.15

Gene sequence:

>1221_bases
ATGGACTCGCTGATCACGGCCGCGGCGCGCGCGCTCGCCGCGGGTGATCCGCTCGGCGCGCTGAACCGCGTCGCGCTGCG
CGACGATGCGCCCGCGCTCGCGCTGCGCGGCATCGCGATGGCGCAGCTCGGCGAGTTCGTCCGGGCAAAGGCGCTCGTGC
GCCGCGCGGCTCGCGCGTTCAGCCCGAACGAAGCGCTCGCCCGCGCGCGATGCGTCGTCGCCGAAGCCGAGATCGCGCTC
GCGTCGCGCGAGCTCGGCTGGCCCGAGAAGGCGCTCGACGCGGCGCGCGCGACGCTCGAGGCGCACGGCGACAGCGTCAA
TGCCGCGCATGCGCGATACCTCGCGATCCGCCGCCTGCTGCTGATCGGCCGCGTCGACGAAGCCGCGCGCACGCTCGCCG
CGCTCGATGCCGCCACGCACCCGCCCGCGTTGCGGGCCGCGCACGAGCTGATCGTCGCGGGTATCGCGCTGCGGCGCATC
GAGACAAAGCCCGCACGCGCGGCCCTCGCCCGCGCCGAGCGCGCGGCGCGCGACGCGGGCATTCCCGCGCTCGCGGCCGA
AGTCGAGCGCGCGTTTCGCGTTCTCGACACGCCCGCCGCGCGCCTCGTCGCACGCGGCCAAACGCGCGCGCTGCGGCTCG
ACGAAGTCGAGGCCTGGCGCGCATCGGCGTCGCTCGTCGTCGACGCGTGCCGCCGCGTCGTGCACGACGCGCGCGCGACG
GTTCCGCTCGCGCGCCGCCCCGTGCTGTTCGCGCTTGCGCGCGCGCTCGGCGAGGCCTGGCCCGGCGACGCGCCGCGCGA
GGCGCTCGTCGCCCGCGCGTTTCGCGTGAAGCATGCCGACGAATCGCACCGCGCGCGGCTGCGCGTCGAGATCGGGCGGC
TGCGCGCCCTGCTAGGCGAACTGGCCGACATTCGCGCGACGCAGCGGGGGTTCGTGCTGACCCCGCGCCGGGCGCCCGAC
GTGGCGGTGCTCGCGCGCCCGCACGAGGACGCGCACGCGGCCGTGCTCGCCCTCCTCGCCGACGGCGAATCGTGGTCGAG
TTCCGCGCTTGCGCTCGCGCTCGGCGCGAGCCAGCGCACCGTGCAGCGCTCGCTCGACGCGCTCGCGGCGGCCGGCAACG
CGCAATCGTTCGGCCGCGGCCGCGCGCGCCGCTGGACGACCCCGCCCGTGCCCGGATTCGCGACGACCTTGTTACTCCCG
GCGCCGCTGCCGGGCGATTAG

Upstream 100 bases:

>100_bases
TCGATCGTTCCGCGATCCGGCGCGCGGGGAGTGTGATCGCGTGGTGGTAGATTAGTCGCGGGCTTCGAACGGTGGGAGTG
ACAAGTGTGGCGGGATTCCG

Downstream 100 bases:

>100_bases
GATGACCCCATCGAGCAACCGGGAGACGGACATGAAGCGATCGAGCGCCGAAATCATCCAGGAATACGGCCCGTTTCCGG
GCGTCGACAGCGTGCACGGC

Product: TPR repeat protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDSLITAAARALAAGDPLGALNRVALRDDAPALALRGIAMAQLGEFVRAKALVRRAARAFSPNEALARARCVVAEAEIAL
ASRELGWPEKALDAARATLEAHGDSVNAAHARYLAIRRLLLIGRVDEAARTLAALDAATHPPALRAAHELIVAGIALRRI
ETKPARAALARAERAARDAGIPALAAEVERAFRVLDTPAARLVARGQTRALRLDEVEAWRASASLVVDACRRVVHDARAT
VPLARRPVLFALARALGEAWPGDAPREALVARAFRVKHADESHRARLRVEIGRLRALLGELADIRATQRGFVLTPRRAPD
VAVLARPHEDAHAAVLALLADGESWSSSALALALGASQRTVQRSLDALAAAGNAQSFGRGRARRWTTPPVPGFATTLLLP
APLPGD

Sequences:

>Translated_406_residues
MDSLITAAARALAAGDPLGALNRVALRDDAPALALRGIAMAQLGEFVRAKALVRRAARAFSPNEALARARCVVAEAEIAL
ASRELGWPEKALDAARATLEAHGDSVNAAHARYLAIRRLLLIGRVDEAARTLAALDAATHPPALRAAHELIVAGIALRRI
ETKPARAALARAERAARDAGIPALAAEVERAFRVLDTPAARLVARGQTRALRLDEVEAWRASASLVVDACRRVVHDARAT
VPLARRPVLFALARALGEAWPGDAPREALVARAFRVKHADESHRARLRVEIGRLRALLGELADIRATQRGFVLTPRRAPD
VAVLARPHEDAHAAVLALLADGESWSSSALALALGASQRTVQRSLDALAAAGNAQSFGRGRARRWTTPPVPGFATTLLLP
APLPGD
>Mature_406_residues
MDSLITAAARALAAGDPLGALNRVALRDDAPALALRGIAMAQLGEFVRAKALVRRAARAFSPNEALARARCVVAEAEIAL
ASRELGWPEKALDAARATLEAHGDSVNAAHARYLAIRRLLLIGRVDEAARTLAALDAATHPPALRAAHELIVAGIALRRI
ETKPARAALARAERAARDAGIPALAAEVERAFRVLDTPAARLVARGQTRALRLDEVEAWRASASLVVDACRRVVHDARAT
VPLARRPVLFALARALGEAWPGDAPREALVARAFRVKHADESHRARLRVEIGRLRALLGELADIRATQRGFVLTPRRAPD
VAVLARPHEDAHAAVLALLADGESWSSSALALALGASQRTVQRSLDALAAAGNAQSFGRGRARRWTTPPVPGFATTLLLP
APLPGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43073; Mature: 43073

Theoretical pI: Translated: 11.80; Mature: 11.80

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLITAAARALAAGDPLGALNRVALRDDAPALALRGIAMAQLGEFVRAKALVRRAARAF
CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPNEALARARCVVAEAEIALASRELGWPEKALDAARATLEAHGDSVNAAHARYLAIRRLL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LIGRVDEAARTLAALDAATHPPALRAAHELIVAGIALRRIETKPARAALARAERAARDAG
HHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
IPALAAEVERAFRVLDTPAARLVARGQTRALRLDEVEAWRASASLVVDACRRVVHDARAT
CHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPLARRPVLFALARALGEAWPGDAPREALVARAFRVKHADESHRARLRVEIGRLRALLGE
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LADIRATQRGFVLTPRRAPDVAVLARPHEDAHAAVLALLADGESWSSSALALALGASQRT
HHHHHHHCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHH
VQRSLDALAAAGNAQSFGRGRARRWTTPPVPGFATTLLLPAPLPGD
HHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHEEECCCCCCC
>Mature Secondary Structure
MDSLITAAARALAAGDPLGALNRVALRDDAPALALRGIAMAQLGEFVRAKALVRRAARAF
CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPNEALARARCVVAEAEIALASRELGWPEKALDAARATLEAHGDSVNAAHARYLAIRRLL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LIGRVDEAARTLAALDAATHPPALRAAHELIVAGIALRRIETKPARAALARAERAARDAG
HHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
IPALAAEVERAFRVLDTPAARLVARGQTRALRLDEVEAWRASASLVVDACRRVVHDARAT
CHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPLARRPVLFALARALGEAWPGDAPREALVARAFRVKHADESHRARLRVEIGRLRALLGE
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LADIRATQRGFVLTPRRAPDVAVLARPHEDAHAAVLALLADGESWSSSALALALGASQRT
HHHHHHHCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHH
VQRSLDALAAAGNAQSFGRGRARRWTTPPVPGFATTLLLPAPLPGD
HHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA