| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812773
Identifier: 237812773
GI number: 237812773
Start: 2461489
End: 2462142
Strand: Reverse
Name: 237812773
Synonym: GBP346_A2527
Alternate gene names: NA
Gene position: 2462142-2461489 (Counterclockwise)
Preceding gene: 237812774
Following gene: 237812772
Centisome position: 60.07
GC content: 75.23
Gene sequence:
>654_bases ATGAAACCGTTGCTGCGCGCCGTTCTTCTGATCGATGCCGTGCTGCTCGCCGCGTTCGGCGTGCTGTTCGTGCTGACTCC GTGGAAAGCGCTGTACGACGCGCTGCAACTCGTCACCGTCGATCCCGCGATGGTCGGCCAGGCGTTCGGCATCGCGCTCC TCGGGCTGGCGTGGCTGTCCGTGCACGCCGCGTTCAACGGCGATCTGACCGCGGGCGTCGCGCGCGCGGTCGGGCACGTG AACTGGCTGACGGGCGTCGTGATGCTCGTGTGGCTGCTCGCGGTCCGCTCGCCGCAGTTGTCGTCGTTCGGCCAATTTGT ATCGGTCGTCGCGGGGGCCGTGCTGCTCGTGATCGGTTTCGGCGGCGTGCGGCTCGCGGCTGCGGTGCGGCGGCGCGAGA AGGCGCAGGCGGCCGACGTGCGCGGCGCGTCGAAGCGCGCTGCGCAGCCGGCCATGGCGCCGCCCGCGGCCGCGCGGATC GAGCCGGACGTGTCGCGCGTGAGCACCGCGCCGGGCGCACCCGCCGCCGCGTCGGCCGCGCGCGCCGCGCCGGCCGCCGT GAACGCGGGCACCGCGGCGGCGACGCCTGCCGCGCGCGAGGACGCCGCGCCGAGCGCGCTCGGCGACGCGGCGCGACCGC CGTCGCAACCGTGA
Upstream 100 bases:
>100_bases CGAGTTCGTTCAGATCACCGCAGCCGGCATGCGCGAGTCGCACGTGCACGACGTGCAGATCACGAAGGAAGCCCCCAACT ATCACGTGGACTGATCGCCG
Downstream 100 bases:
>100_bases TCGGCGCGGTTTTCCGGCCCGTCAGGCCGCCGCGCTTCGCGGCGGCGCGATCGCCCCGATACATATTCGATGCAGCGCCG CGTGCGCTGCTTTTGTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKPLLRAVLLIDAVLLAAFGVLFVLTPWKALYDALQLVTVDPAMVGQAFGIALLGLAWLSVHAAFNGDLTAGVARAVGHV NWLTGVVMLVWLLAVRSPQLSSFGQFVSVVAGAVLLVIGFGGVRLAAAVRRREKAQAADVRGASKRAAQPAMAPPAAARI EPDVSRVSTAPGAPAAASAARAAPAAVNAGTAAATPAAREDAAPSALGDAARPPSQP
Sequences:
>Translated_217_residues MKPLLRAVLLIDAVLLAAFGVLFVLTPWKALYDALQLVTVDPAMVGQAFGIALLGLAWLSVHAAFNGDLTAGVARAVGHV NWLTGVVMLVWLLAVRSPQLSSFGQFVSVVAGAVLLVIGFGGVRLAAAVRRREKAQAADVRGASKRAAQPAMAPPAAARI EPDVSRVSTAPGAPAAASAARAAPAAVNAGTAAATPAAREDAAPSALGDAARPPSQP >Mature_217_residues MKPLLRAVLLIDAVLLAAFGVLFVLTPWKALYDALQLVTVDPAMVGQAFGIALLGLAWLSVHAAFNGDLTAGVARAVGHV NWLTGVVMLVWLLAVRSPQLSSFGQFVSVVAGAVLLVIGFGGVRLAAAVRRREKAQAADVRGASKRAAQPAMAPPAAARI EPDVSRVSTAPGAPAAASAARAAPAAVNAGTAAATPAAREDAAPSALGDAARPPSQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21889; Mature: 21889
Theoretical pI: Translated: 11.60; Mature: 11.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLLRAVLLIDAVLLAAFGVLFVLTPWKALYDALQLVTVDPAMVGQAFGIALLGLAWLS CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VHAAFNGDLTAGVARAVGHVNWLTGVVMLVWLLAVRSPQLSSFGQFVSVVAGAVLLVIGF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GGVRLAAAVRRREKAQAADVRGASKRAAQPAMAPPAAARIEPDVSRVSTAPGAPAAASAA CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHCCCHHHHHCCCCCCCHHHHHH RAAPAAVNAGTAAATPAAREDAAPSALGDAARPPSQP HHCCHHCCCCCCCCCCCHHHCCCCHHHCCCCCCCCCC >Mature Secondary Structure MKPLLRAVLLIDAVLLAAFGVLFVLTPWKALYDALQLVTVDPAMVGQAFGIALLGLAWLS CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VHAAFNGDLTAGVARAVGHVNWLTGVVMLVWLLAVRSPQLSSFGQFVSVVAGAVLLVIGF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GGVRLAAAVRRREKAQAADVRGASKRAAQPAMAPPAAARIEPDVSRVSTAPGAPAAASAA CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHCCCHHHHHCCCCCCCHHHHHH RAAPAAVNAGTAAATPAAREDAAPSALGDAARPPSQP HHCCHHCCCCCCCCCCCHHHCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA