| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812769
Identifier: 237812769
GI number: 237812769
Start: 2457909
End: 2458835
Strand: Direct
Name: 237812769
Synonym: GBP346_A2523
Alternate gene names: NA
Gene position: 2457909-2458835 (Clockwise)
Preceding gene: 237812768
Following gene: 237812770
Centisome position: 59.97
GC content: 56.63
Gene sequence:
>927_bases TTGATCGACGCCCTGCTCGCTGAAAAAGACGTCGGTCGAATTTCGGCAGCCATTCTCGAGAAGGATATCCATGTCACAGA TGCCTTACGGGCATTGTCGACCCTGGCGCACGAACACGTCACGCTGGTCTTCTGTGGTGGCACCAACCTCTCGAAGGCAC ACGGCATCATTGAGCGGATGTCGGAAGACGTTGACCTCAAAATCGTGCTGTCTCCTTCGCACGGTCTGAGCGACAGCGCG TTAAAGAAGCATCTTTCCGCATTGAAAAAGAAGGTGGCCGAGACGCTAACAGTGCTGGATTTCCAGGAGATTCTGGAGGC GGCGAGCGCGAGAAATGCCAACCGGTATTTCGCAAGCAGTTGGCGCTACGCGTCGGTTTACGGACCGCATCAGAGCCTGC GCACCCATTTGAGCGTCGAGTTCACAGTGCGGACACCTGCCTTTGATACGTCAAAGCGTCAGCTCGGCTATCTGATCGAT CGACTGGCGGATCGAACGGGCAACCCCTTCGCCTTCCAATGTGTCTCCGTGGAAGAGACCCTCGCGGAAAAGGTCCTCGC GTTTCTGCGCCGTTTTGCCGAACACCGCGCAAAGGTACGCGAGAACTGGGACGAAGCGCTGGTGCGACATATCTACGACA CCTGGCGTATTGTGTCTGTCGACCCGGCCGCCGCTGACCGCGCAGCGACCCACTTCAAGGATCTCGTCGAATTTGATCGT GGTGAATTTCGGCTGCATGAGGCGTTCGTCACCGACCCCGCGACGTGCATGAAGAGCGCGCTCGGCGAAATCGAGCACGA CGCCCAAACGATCAGCGAATATGCCGACAAGCTCATTCCGTTGATTTATGGCAAGGACAAGCCAACCTTCAACGAGGCGT TCGGTGTGTTCAAGGACGTTGCCAACAAATTGCTCGGCACACTTTAG
Upstream 100 bases:
>100_bases GGGGTGGTAATCAACACCGGAAATCGGCGTATTTCCCGCAAGCTGGGCTTCGGACAAAAGACCATCGAATATGAAAACAA TTACAACCGACCAACGGGAG
Downstream 100 bases:
>100_bases CCCGGCCTTTAACCGATGAAAGAGCAAAGGCTAAACTGGACTCCCCTCTCCGCCTTCGATCATCTGTTCAGCAGCCGTCA CACGGCCGGTGCGAATCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MIDALLAEKDVGRISAAILEKDIHVTDALRALSTLAHEHVTLVFCGGTNLSKAHGIIERMSEDVDLKIVLSPSHGLSDSA LKKHLSALKKKVAETLTVLDFQEILEAASARNANRYFASSWRYASVYGPHQSLRTHLSVEFTVRTPAFDTSKRQLGYLID RLADRTGNPFAFQCVSVEETLAEKVLAFLRRFAEHRAKVRENWDEALVRHIYDTWRIVSVDPAAADRAATHFKDLVEFDR GEFRLHEAFVTDPATCMKSALGEIEHDAQTISEYADKLIPLIYGKDKPTFNEAFGVFKDVANKLLGTL
Sequences:
>Translated_308_residues MIDALLAEKDVGRISAAILEKDIHVTDALRALSTLAHEHVTLVFCGGTNLSKAHGIIERMSEDVDLKIVLSPSHGLSDSA LKKHLSALKKKVAETLTVLDFQEILEAASARNANRYFASSWRYASVYGPHQSLRTHLSVEFTVRTPAFDTSKRQLGYLID RLADRTGNPFAFQCVSVEETLAEKVLAFLRRFAEHRAKVRENWDEALVRHIYDTWRIVSVDPAAADRAATHFKDLVEFDR GEFRLHEAFVTDPATCMKSALGEIEHDAQTISEYADKLIPLIYGKDKPTFNEAFGVFKDVANKLLGTL >Mature_308_residues MIDALLAEKDVGRISAAILEKDIHVTDALRALSTLAHEHVTLVFCGGTNLSKAHGIIERMSEDVDLKIVLSPSHGLSDSA LKKHLSALKKKVAETLTVLDFQEILEAASARNANRYFASSWRYASVYGPHQSLRTHLSVEFTVRTPAFDTSKRQLGYLID RLADRTGNPFAFQCVSVEETLAEKVLAFLRRFAEHRAKVRENWDEALVRHIYDTWRIVSVDPAAADRAATHFKDLVEFDR GEFRLHEAFVTDPATCMKSALGEIEHDAQTISEYADKLIPLIYGKDKPTFNEAFGVFKDVANKLLGTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34468; Mature: 34468
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDALLAEKDVGRISAAILEKDIHVTDALRALSTLAHEHVTLVFCGGTNLSKAHGIIERM CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH SEDVDLKIVLSPSHGLSDSALKKHLSALKKKVAETLTVLDFQEILEAASARNANRYFASS CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC WRYASVYGPHQSLRTHLSVEFTVRTPAFDTSKRQLGYLIDRLADRTGNPFAFQCVSVEET CCEEEECCCHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHH LAEKVLAFLRRFAEHRAKVRENWDEALVRHIYDTWRIVSVDPAAADRAATHFKDLVEFDR HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCC GEFRLHEAFVTDPATCMKSALGEIEHDAQTISEYADKLIPLIYGKDKPTFNEAFGVFKDV CHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ANKLLGTL HHHHHCCC >Mature Secondary Structure MIDALLAEKDVGRISAAILEKDIHVTDALRALSTLAHEHVTLVFCGGTNLSKAHGIIERM CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH SEDVDLKIVLSPSHGLSDSALKKHLSALKKKVAETLTVLDFQEILEAASARNANRYFASS CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC WRYASVYGPHQSLRTHLSVEFTVRTPAFDTSKRQLGYLIDRLADRTGNPFAFQCVSVEET CCEEEECCCHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHH LAEKVLAFLRRFAEHRAKVRENWDEALVRHIYDTWRIVSVDPAAADRAATHFKDLVEFDR HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCC GEFRLHEAFVTDPATCMKSALGEIEHDAQTISEYADKLIPLIYGKDKPTFNEAFGVFKDV CHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ANKLLGTL HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA