| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812765
Identifier: 237812765
GI number: 237812765
Start: 2455039
End: 2456373
Strand: Reverse
Name: 237812765
Synonym: GBP346_A2519
Alternate gene names: NA
Gene position: 2456373-2455039 (Counterclockwise)
Preceding gene: 237812766
Following gene: 237812764
Centisome position: 59.93
GC content: 61.42
Gene sequence:
>1335_bases ATGAATACCGCTGTGATTGCTAGCGACTCGCCGGACGATCAAGAATCCGGCTCCTTCGAGGCATACTTTCGCGATTCGGC ATTCGCGATCGAATCGCCGATAGCTTGGGCGCTGTCTCAACGGCTCGAAACTCTTGACGCGCTACGCGGCCTGATTTCAG GTAGTCAGGCTGTTGCGCGTCTGCGTCTGTTGGTATTCCTGGAACTCGCTGGCCAGCCACAGGGCCGCCTACAACGGGAT GACCTGACCCAACTGTTCCACGTGCTCAAATCCGATGCACTCGACGTGGTGCTGAAACGCCTGCGCGAGCTTGGCCTGCT AGTTTGGGACGCGACGGCTCAAGACTACCATCTCTCGTCACTTGCTCAACAGGTGCATGCGCTCCTCGCACCGCTCACAC GCGCGGCAACTGAGGATGACGAGATGGCGACGTTGCTTGCGCAGGTCGCTGGAGCGCAAGCGCTGGGCCTCTCGGATGCC AGCCAAATCAAGCATCTACATGCCCAGCTCGCGCGTCTACATGACGAGTTTGCAGATGCGATCGCGAGCGGCTCAGAGGC GCGCCTGCGCGATGCTCGCCCCCGCTTTGAAAGAGCGCTGACATTGGTCGAGCGTGCCGGCGAGGCACTTACGGCCTTGA TCCGAAGTGATTACGATGATCCGCGTCTAGAACGAGAAGCGCGGTCCCTAGGCCACAGTCAGGCACGACTATTAGCGATG GCCAGTCAGTTCACGCGCGCGTTGCAGCAGGCAGATCGCCAGCGGGTTACGCTGGGCAGCACGGGTGTTACCAGTTCTGA CGTGCGTGCGTGGCTCCAATCGCATCCCGCGCTGTACGAGTTGCTAGGCGATGCGCTGTCCACCGGCGTACGGCCCCTAT TCGTGAGCGGGCACGACTTGCTGGACGTGGCCGAAGGCGAGTTCGAACGCGAGCGGCCGGATCCGCAGCGCTCCGTAGGG CTACCACCCGCAGTTCATGCAAAGCCGGGAGAGCTGGAAGCGGTGCGTATGCCGGTAGAACTTGGGATGCTGATCGCACA GTTGTCAGACTGGTCTGTTGTGCCCGCCGGCGAGCTACCTTTGCAACGGCGAGTCGGCGAGGTCGTGCTTGGTGGGCGCT TTGCGCAGGCAGCCTATCGGATGCAGCTGTTGCCTTTGCTCGGCGATGTTCAAGCGCGTGGCCTGCAGGGTCAAACGGGA GATTTCGCGCGCCTGCCTTGGCGGGCGGCACTGTTGCCTGTCCTGGACGAAGTAGACGATCCCCACGTTGCCGCGCTGAG CGCTGGCCACCTCCAACCTGAAAATCTACCCGACCAAGATGAACGATTCTCTTGA
Upstream 100 bases:
>100_bases CAATTTGACGAATCGCTCAGATCCAGGCAGGCGCTCAATCCGCTGAAGCGGTACGAGTCCTTGTGTTCTTCGAACTTCAA TGCTGCTGACTCGCATCTAA
Downstream 100 bases:
>100_bases TGATGCCGCGCTGCTTGCGGCCGAGCTACTAGCTCGCCGCTGGTTGTCGCGCCAGCACCCGCGCGTACGCCGCGCCTTGA TCGACGCCGACGTTTGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MNTAVIASDSPDDQESGSFEAYFRDSAFAIESPIAWALSQRLETLDALRGLISGSQAVARLRLLVFLELAGQPQGRLQRD DLTQLFHVLKSDALDVVLKRLRELGLLVWDATAQDYHLSSLAQQVHALLAPLTRAATEDDEMATLLAQVAGAQALGLSDA SQIKHLHAQLARLHDEFADAIASGSEARLRDARPRFERALTLVERAGEALTALIRSDYDDPRLEREARSLGHSQARLLAM ASQFTRALQQADRQRVTLGSTGVTSSDVRAWLQSHPALYELLGDALSTGVRPLFVSGHDLLDVAEGEFERERPDPQRSVG LPPAVHAKPGELEAVRMPVELGMLIAQLSDWSVVPAGELPLQRRVGEVVLGGRFAQAAYRMQLLPLLGDVQARGLQGQTG DFARLPWRAALLPVLDEVDDPHVAALSAGHLQPENLPDQDERFS
Sequences:
>Translated_444_residues MNTAVIASDSPDDQESGSFEAYFRDSAFAIESPIAWALSQRLETLDALRGLISGSQAVARLRLLVFLELAGQPQGRLQRD DLTQLFHVLKSDALDVVLKRLRELGLLVWDATAQDYHLSSLAQQVHALLAPLTRAATEDDEMATLLAQVAGAQALGLSDA SQIKHLHAQLARLHDEFADAIASGSEARLRDARPRFERALTLVERAGEALTALIRSDYDDPRLEREARSLGHSQARLLAM ASQFTRALQQADRQRVTLGSTGVTSSDVRAWLQSHPALYELLGDALSTGVRPLFVSGHDLLDVAEGEFERERPDPQRSVG LPPAVHAKPGELEAVRMPVELGMLIAQLSDWSVVPAGELPLQRRVGEVVLGGRFAQAAYRMQLLPLLGDVQARGLQGQTG DFARLPWRAALLPVLDEVDDPHVAALSAGHLQPENLPDQDERFS >Mature_444_residues MNTAVIASDSPDDQESGSFEAYFRDSAFAIESPIAWALSQRLETLDALRGLISGSQAVARLRLLVFLELAGQPQGRLQRD DLTQLFHVLKSDALDVVLKRLRELGLLVWDATAQDYHLSSLAQQVHALLAPLTRAATEDDEMATLLAQVAGAQALGLSDA SQIKHLHAQLARLHDEFADAIASGSEARLRDARPRFERALTLVERAGEALTALIRSDYDDPRLEREARSLGHSQARLLAM ASQFTRALQQADRQRVTLGSTGVTSSDVRAWLQSHPALYELLGDALSTGVRPLFVSGHDLLDVAEGEFERERPDPQRSVG LPPAVHAKPGELEAVRMPVELGMLIAQLSDWSVVPAGELPLQRRVGEVVLGGRFAQAAYRMQLLPLLGDVQARGLQGQTG DFARLPWRAALLPVLDEVDDPHVAALSAGHLQPENLPDQDERFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48473; Mature: 48473
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAVIASDSPDDQESGSFEAYFRDSAFAIESPIAWALSQRLETLDALRGLISGSQAVAR CCCEEECCCCCCCCCCCCEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHH LRLLVFLELAGQPQGRLQRDDLTQLFHVLKSDALDVVLKRLRELGLLVWDATAQDYHLSS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH LAQQVHALLAPLTRAATEDDEMATLLAQVAGAQALGLSDASQIKHLHAQLARLHDEFADA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHH IASGSEARLRDARPRFERALTLVERAGEALTALIRSDYDDPRLEREARSLGHSQARLLAM HHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH ASQFTRALQQADRQRVTLGSTGVTSSDVRAWLQSHPALYELLGDALSTGVRPLFVSGHDL HHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEECCCCH LDVAEGEFERERPDPQRSVGLPPAVHAKPGELEAVRMPVELGMLIAQLSDWSVVPAGELP HHHHCCCHHHCCCCCHHHCCCCCCCCCCCCCCHHEECCHHHHHHHHHHCCCCCCCCCCCC LQRRVGEVVLGGRFAQAAYRMQLLPLLGDVQARGLQGQTGDFARLPWRAALLPVLDEVDD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHCCCC PHVAALSAGHLQPENLPDQDERFS CCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTAVIASDSPDDQESGSFEAYFRDSAFAIESPIAWALSQRLETLDALRGLISGSQAVAR CCCEEECCCCCCCCCCCCEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHH LRLLVFLELAGQPQGRLQRDDLTQLFHVLKSDALDVVLKRLRELGLLVWDATAQDYHLSS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH LAQQVHALLAPLTRAATEDDEMATLLAQVAGAQALGLSDASQIKHLHAQLARLHDEFADA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHH IASGSEARLRDARPRFERALTLVERAGEALTALIRSDYDDPRLEREARSLGHSQARLLAM HHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH ASQFTRALQQADRQRVTLGSTGVTSSDVRAWLQSHPALYELLGDALSTGVRPLFVSGHDL HHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEECCCCH LDVAEGEFERERPDPQRSVGLPPAVHAKPGELEAVRMPVELGMLIAQLSDWSVVPAGELP HHHHCCCHHHCCCCCHHHCCCCCCCCCCCCCCHHEECCHHHHHHHHHHCCCCCCCCCCCC LQRRVGEVVLGGRFAQAAYRMQLLPLLGDVQARGLQGQTGDFARLPWRAALLPVLDEVDD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHCCCC PHVAALSAGHLQPENLPDQDERFS CCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA