| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812762
Identifier: 237812762
GI number: 237812762
Start: 2450324
End: 2451559
Strand: Reverse
Name: 237812762
Synonym: GBP346_A2515
Alternate gene names: NA
Gene position: 2451559-2450324 (Counterclockwise)
Preceding gene: 237812763
Following gene: 237812761
Centisome position: 59.81
GC content: 62.46
Gene sequence:
>1236_bases ATGATCACGTCGGTGACGAATTGGGTGGATACAGAGCGCAAGCGCGGGATGCGAGATCGCTGCGCGTCTGGCGGGGTACC TGAGCGCCTACCCTTGCTTGATCCCGAGCAACGTGCACTGCTGCAACGCTGGGTGCGGACTGACGGCGTGCGCCGTAGCC GAGCTGCGCTGCTGAGCGAGGCCGGACCCGCGGCGATTGAGCGCGCCGAGGAACTTTGTGAGCGACTGCTGCGTGAAGGT TGGATCGTACGACGCGAGCGGCTCACCAATGGTACATGGCAATGGGATTCGATTATGTGGCGCGATCTTGCTCGGTTGCA GTCGATATTGGCAGTCTCCAGTCCGCGCCAACGCGCAGAACAGCGGAAGGTGCTTGTCGAGCAGGGCGTGGCTTGGTTGA GGTCGCGATCCGAACGGGGCACTTCAGGTGCGCTCGATCCCGACCTGTTGGACGAGCTTACTCGGGCCTTGGCGCAACTG GGTGAAGACAAGACGTTGCGCCTCGACCTCCTTGGCACGCGCCTCGATTTGCTCCGGGCCGTCGCGGCCTGGCATGATGC AGGTGGCCAGGGGACTCGCCGCGATTTTGCGTTGCAGGCGCGCGGGACGACCAAGGCGATTACCGATGCCGACTGGCGTT GGCTGGATGCTGCATTCGACTTGGAACGTTTGCGTATTGCGCGGTTCACTCCTGTAGCCTGGCTGGCGGGAGATGTTTTG CTGCAATGGGCTGGGCAGCTGGTGCACCTCCATCCCTTGCACTTTCTAGCACTGCCGTTATCAGATCTGTCCCGCGTCGA GGCTGCTTCAACGCCAACCCGATGGTGGCTTATCGAAAACCGCGCTAGCTTCGAACGCCAAGCGCTAAGGCGCGAGTCCG GTACGGGTCTGGTGTGGATGCCTGGGCGTCCCTCCGCGGCATGGCTGGAAGCTATCGGTCATCTGTTGACACTTTCGCCC GCACCGGCCTGGATCAGCGCAGATGCCGATCCGGCGGGCGTGGACATCGCCTGCACCGTTGGGGGACTCTGGCAGGCGTA CGGCCTGACTTGGGCACCGTATAAAATGGATGTGAGTCAATGGGAGGATACCTCGCAGCGTTGGCCGCTTAACGAACATG ACCGTAAGCTGCTCGCCGTCCTATTGGCACGGCCCGATCTGCCGCCCGACTTGCGCGAGCTATGCGAAGCGATGCGGCGA GACGGTCGGAAGGCAGAGCAAGAGGGTTGGGTTTGA
Upstream 100 bases:
>100_bases AACCCGCGGACATCACATTAGTCACATCCAAGAAGCCTCGCGACTCGCGCTGGGCACCGCCTATTGGAGTGCTGCAGCGA CGGATCGAGGCAATCTGAAC
Downstream 100 bases:
>100_bases ACTGAGGCCCGGCCTTTGCTGCTGCAGTGCGCTTCGCATGTTTTTGATGGGAGAAACGGCCGGAGCCGATGGCCATGGTA CCAGTTGGCTCCACCAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MITSVTNWVDTERKRGMRDRCASGGVPERLPLLDPEQRALLQRWVRTDGVRRSRAALLSEAGPAAIERAEELCERLLREG WIVRRERLTNGTWQWDSIMWRDLARLQSILAVSSPRQRAEQRKVLVEQGVAWLRSRSERGTSGALDPDLLDELTRALAQL GEDKTLRLDLLGTRLDLLRAVAAWHDAGGQGTRRDFALQARGTTKAITDADWRWLDAAFDLERLRIARFTPVAWLAGDVL LQWAGQLVHLHPLHFLALPLSDLSRVEAASTPTRWWLIENRASFERQALRRESGTGLVWMPGRPSAAWLEAIGHLLTLSP APAWISADADPAGVDIACTVGGLWQAYGLTWAPYKMDVSQWEDTSQRWPLNEHDRKLLAVLLARPDLPPDLRELCEAMRR DGRKAEQEGWV
Sequences:
>Translated_411_residues MITSVTNWVDTERKRGMRDRCASGGVPERLPLLDPEQRALLQRWVRTDGVRRSRAALLSEAGPAAIERAEELCERLLREG WIVRRERLTNGTWQWDSIMWRDLARLQSILAVSSPRQRAEQRKVLVEQGVAWLRSRSERGTSGALDPDLLDELTRALAQL GEDKTLRLDLLGTRLDLLRAVAAWHDAGGQGTRRDFALQARGTTKAITDADWRWLDAAFDLERLRIARFTPVAWLAGDVL LQWAGQLVHLHPLHFLALPLSDLSRVEAASTPTRWWLIENRASFERQALRRESGTGLVWMPGRPSAAWLEAIGHLLTLSP APAWISADADPAGVDIACTVGGLWQAYGLTWAPYKMDVSQWEDTSQRWPLNEHDRKLLAVLLARPDLPPDLRELCEAMRR DGRKAEQEGWV >Mature_411_residues MITSVTNWVDTERKRGMRDRCASGGVPERLPLLDPEQRALLQRWVRTDGVRRSRAALLSEAGPAAIERAEELCERLLREG WIVRRERLTNGTWQWDSIMWRDLARLQSILAVSSPRQRAEQRKVLVEQGVAWLRSRSERGTSGALDPDLLDELTRALAQL GEDKTLRLDLLGTRLDLLRAVAAWHDAGGQGTRRDFALQARGTTKAITDADWRWLDAAFDLERLRIARFTPVAWLAGDVL LQWAGQLVHLHPLHFLALPLSDLSRVEAASTPTRWWLIENRASFERQALRRESGTGLVWMPGRPSAAWLEAIGHLLTLSP APAWISADADPAGVDIACTVGGLWQAYGLTWAPYKMDVSQWEDTSQRWPLNEHDRKLLAVLLARPDLPPDLRELCEAMRR DGRKAEQEGWV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46557; Mature: 46557
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSVTNWVDTERKRGMRDRCASGGVPERLPLLDPEQRALLQRWVRTDGVRRSRAALLSE CCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHC AGPAAIERAEELCERLLREGWIVRRERLTNGTWQWDSIMWRDLARLQSILAVSSPRQRAE CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH QRKVLVEQGVAWLRSRSERGTSGALDPDLLDELTRALAQLGEDKTLRLDLLGTRLDLLRA HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH VAAWHDAGGQGTRRDFALQARGTTKAITDADWRWLDAAFDLERLRIARFTPVAWLAGDVL HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH LQWAGQLVHLHPLHFLALPLSDLSRVEAASTPTRWWLIENRASFERQALRRESGTGLVWM HHHHHHHEEECHHHHHHCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEE PGRPSAAWLEAIGHLLTLSPAPAWISADADPAGVDIACTVGGLWQAYGLTWAPYKMDVSQ CCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCHHH WEDTSQRWPLNEHDRKLLAVLLARPDLPPDLRELCEAMRRDGRKAEQEGWV HCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure MITSVTNWVDTERKRGMRDRCASGGVPERLPLLDPEQRALLQRWVRTDGVRRSRAALLSE CCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHC AGPAAIERAEELCERLLREGWIVRRERLTNGTWQWDSIMWRDLARLQSILAVSSPRQRAE CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH QRKVLVEQGVAWLRSRSERGTSGALDPDLLDELTRALAQLGEDKTLRLDLLGTRLDLLRA HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH VAAWHDAGGQGTRRDFALQARGTTKAITDADWRWLDAAFDLERLRIARFTPVAWLAGDVL HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH LQWAGQLVHLHPLHFLALPLSDLSRVEAASTPTRWWLIENRASFERQALRRESGTGLVWM HHHHHHHEEECHHHHHHCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEE PGRPSAAWLEAIGHLLTLSPAPAWISADADPAGVDIACTVGGLWQAYGLTWAPYKMDVSQ CCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCHHH WEDTSQRWPLNEHDRKLLAVLLARPDLPPDLRELCEAMRRDGRKAEQEGWV HCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA