| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812733
Identifier: 237812733
GI number: 237812733
Start: 2428381
End: 2428824
Strand: Direct
Name: 237812733
Synonym: GBP346_A2486
Alternate gene names: NA
Gene position: 2428381-2428824 (Clockwise)
Preceding gene: 237812732
Following gene: 237812735
Centisome position: 59.25
GC content: 69.59
Gene sequence:
>444_bases ATGTCCTTCCCGAAAAAACGCCGACGCGCGCAACCGGACGGCCAGGAATCGTTCCTCGCGGTGCTGCGCCATGCGAAACC GTTCGCCCAGCTCGACACGAAGATCGCGCGCGCCCGCGCGCAGGACGAGCCCGTGCTCTACGCGCACGTGCTGCCCGGCC TCGACGTCCTGCTTTGCAGCGTGCGCGGCGCGCAGCCGCCGTACCCCGCGATCGCCGAGCTGCGCAAGCGCTGCATCGAA TCGATCGCCAACGCGCTCGAGCAGCCGCTCGACGGGCTCGAAAACGGCGGCTACTGGTACGAGGCGAACGGCTTCGGCTT TCTCGTGTTCGCGAGCCGCGCCCGCGCGCGCATCCTGCCCGAATTCGGCGCGGGCGTGAAAGCCGGGCTGCGAAGCGGCA TCGGACAACCGAACGCCGGCGATACCACGCCCCGCTCGCTGTAA
Upstream 100 bases:
>100_bases TTTTCGTATGCTATAAGAGATCGACATGCGGCGCACATAGCCGGGAGTGGGTCGCATGAGGATGCCGCATTTCTTGCAAT TGTTTTTGAGGCGAGTGTTT
Downstream 100 bases:
>100_bases TTCTCGCCATCATGAAACGGGCCGTTTGAAACGGCCCGTTCTTCATTCATCCTGCCGCCCGCCTGCGCGACGCGGCGTGC GGGGTTTTCGGCGCATTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSFPKKRRRAQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCSVRGAQPPYPAIAELRKRCIE SIANALEQPLDGLENGGYWYEANGFGFLVFASRARARILPEFGAGVKAGLRSGIGQPNAGDTTPRSL
Sequences:
>Translated_147_residues MSFPKKRRRAQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCSVRGAQPPYPAIAELRKRCIE SIANALEQPLDGLENGGYWYEANGFGFLVFASRARARILPEFGAGVKAGLRSGIGQPNAGDTTPRSL >Mature_146_residues SFPKKRRRAQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCSVRGAQPPYPAIAELRKRCIES IANALEQPLDGLENGGYWYEANGFGFLVFASRARARILPEFGAGVKAGLRSGIGQPNAGDTTPRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16014; Mature: 15882
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPKKRRRAQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCS CCCCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEHHHHCCHHHHHHH VRGAQPPYPAIAELRKRCIESIANALEQPLDGLENGGYWYEANGFGFLVFASRARARILP HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHHCH EFGAGVKAGLRSGIGQPNAGDTTPRSL HHCCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SFPKKRRRAQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCS CCCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEHHHHCCHHHHHHH VRGAQPPYPAIAELRKRCIESIANALEQPLDGLENGGYWYEANGFGFLVFASRARARILP HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHHCH EFGAGVKAGLRSGIGQPNAGDTTPRSL HHCCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA