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The map label for this gene is 237812729

Identifier: 237812729

GI number: 237812729

Start: 2425388

End: 2426068

Strand: Direct

Name: 237812729

Synonym: GBP346_A2482

Alternate gene names: NA

Gene position: 2425388-2426068 (Clockwise)

Preceding gene: 237812728

Following gene: 237812730

Centisome position: 59.18

GC content: 66.81

Gene sequence:

>681_bases
ATGTCGCTTTTCGACTCTATTTCGCGCACGATCAAAGGTCTGCTGAACGACGCGGCGGACTCGGTGCAGGACCCGTCGCG
CGACGCGCGGCAGATCGTGCGGGAGCTCGACGACAGTATCGGCCGCGCGGAAAACTCGCTGATCGAGATCGAAGCGCAGG
TCGCAACGCAACGCAGCAAGCGCGACACCGCCGACGAGCGCGTGAAAAAGTACGAGGACGGCGCGAAGCGCGCGCTGCAA
TCCGGCGACGAGGCGCTCGCGCGCGAGGCGCTCGCCGCGCAGGCGAACGCCGAGGCCGAGCGCGACGCGCTCGCGCGCGA
ACTCGACACGCTCGAGCCGTCGGTCGACAAGCTCAAAGGCCAGATCGCCGACATGCGCGCGCGCCGCAACGATCTGAACG
CGCGCTCGAACATCCTGCAGGCAAAGCAGGAAATCGCGCAGGCGAAGGACGTCGCGGCCACCGCACTCGGCGGAATCGGC
GGCAAGAACCTGTCCGAGGACTTCCAGAAGCTCGAGGACAAGGTCGCGCTGTCGAACGCGCGTTCGGACGCGCGCCTGAA
TTCAGCCGATACGAACAGCGGCCGCGCGCTCGACGACAAGCTCGCGGCGCTGAACAAGGGGCCGTCCGTCGAGGACCGCC
TCGAAGCGCTGAAAAAGCAACTGAACACGCCGGCGCAGTAA

Upstream 100 bases:

>100_bases
CGGTGGTGTAATATCCGCCGACGCGAGCCGCCTGGCCCCGCGGCGAGGCATCGCCCGCGGTGCGCGATGCGCGCATCGTT
CATCATTTACGGAGGAATCC

Downstream 100 bases:

>100_bases
CGGCGGCTCCGCCAGCCGGCGCTTCGCGGCGGCGGCGGCGGCGGCGCGCGCATTCGACGCGCCCGCCGCCGCGCCGCGAA
CATCCGCAAGGAGACGGGCC

Product: PspA/IM30 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSKRDTADERVKKYEDGAKRALQ
SGDEALAREALAAQANAEAERDALARELDTLEPSVDKLKGQIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIG
GKNLSEDFQKLEDKVALSNARSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ

Sequences:

>Translated_226_residues
MSLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSKRDTADERVKKYEDGAKRALQ
SGDEALAREALAAQANAEAERDALARELDTLEPSVDKLKGQIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIG
GKNLSEDFQKLEDKVALSNARSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ
>Mature_225_residues
SLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSKRDTADERVKKYEDGAKRALQS
GDEALAREALAAQANAEAERDALARELDTLEPSVDKLKGQIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIGG
KNLSEDFQKLEDKVALSNARSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 24492; Mature: 24361

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSK
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDTADERVKKYEDGAKRALQSGDEALAREALAAQANAEAERDALARELDTLEPSVDKLKG
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH
QIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIGGKNLSEDFQKLEDKVALSNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
RSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ
HHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSK
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDTADERVKKYEDGAKRALQSGDEALAREALAAQANAEAERDALARELDTLEPSVDKLKG
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH
QIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIGGKNLSEDFQKLEDKVALSNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
RSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ
HHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]