| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812708
Identifier: 237812708
GI number: 237812708
Start: 2405227
End: 2406501
Strand: Reverse
Name: 237812708
Synonym: GBP346_A2461
Alternate gene names: NA
Gene position: 2406501-2405227 (Counterclockwise)
Preceding gene: 237812709
Following gene: 237812706
Centisome position: 58.72
GC content: 70.35
Gene sequence:
>1275_bases ATGCGAAACGAGGAAGGCAGCATGAAACGACGTGATTTTCTGGCCCTGGCGAGCCTTGCCGGCGCGGCGGGCGTATCGTT GCCGGTGCCGTATGCGTTCGCTGCCGCGCCGGGCGAGACGAGCGCAACGGGGGCGATGGGAGCGGTGGGGGCGGCGCGCG CCGCACGCTACTCGAACCTGCTGATTCTCGTCGAGCTCAAGGGCGGCAACGACGGGCTCAACACGGTGATTCCGTACGCG AATCCGCTGTACCGCACGCTGCGCCCGGCGATCGGCGTCAAGCGCGAGCAGGTCGTGCAGCTCGACGAGCGCGCCGCGCT GCATCCGGCGCTTGAGCCGCTCATGCCGATCTGGCGCGACGGACGGCTCGCGATCGTCGAAGGCGTCGGCTATCCGCAGC CGAATCTGTCGCACTTTCGCTCGATCGAGATCTGGGATACCGCGTCGCGCGCGAACGAGTATCTGCGCGAAGGATGGCTC ACGCGCGCGTTCGCGCAGGCGAGCGTGCCGCCCGGTTTCGCCGCGGACGGCATCGTGCTCGGCAGCGCGGAAATGGGGCC GCTCGCGAACGGCGCGCGTGCGATCGCCCTCGTGAATCCCGCGCAGTTCGCGCGCGCGGCGCGACTCGCGCAGCCCGTGT CGCTGCGTGAGCGCAACCCCGCGCTCGCGCACATGATCGACATCGAAAACGACATCGTCAAGGCCGCCGATCGGCTGCGT CCGCATGCGGGCACGCCCGCGCTCGCGACCGCGTTTCCGGGCGGGCCGTTCGGCGCATCGGTGAAGACCGCGATGCAGGT GCTCGCCGCGTGCGACACGCCGCAGCGTACGCCGGCGCCGGGGCAGGGCGTCGCGGTGCTGCGCCTCACGCTGAACGGCT TCGACACGCATCAGAACCAGCCCGGCCAGCAGGCGGGCTTGCTCGGCCAACTGGCGCAAGGGCTGGTGGCGATGCGCTCG GCGTTGATCGAGCTCGGGCGCTGGAACGATACGCTCGTGATGACGTATGCGGAGTTCGGCCGGCGCGCGCGAGAGAATCA GAGCAACGGAACCGATCACGGCACGGCCGCGCCGCATTTCGTGATGGGCGGGCGCGTGCGGGGCGGGCTGTACGGCGCGC CGCCCGCGCTCGACGCGCTCGACGGCAACGGCAACCTGCCTGTCGCCGTCGATTTCCGTCAGCTTTATGCGACCGTGCTC GGCCCATGGTGGGGGCTCGACGCGGCGAGTGTGCTCAGGCAGCGTTTCGAGCCGCTGCCGTTGCTGCGCGCCTGA
Upstream 100 bases:
>100_bases CAGGCCCTGTTGATGGACCCGGCGTATCAACTGAAGTGAAGAACATGAACACGATGACGATGAGACTCCGCGCGATGCGG CGTTGCGCGGGCCGCGTCGA
Downstream 100 bases:
>100_bases TACGCGGGAGCGGGGCGTGCGCGGCGGAGGGCGGCGCGCGTCAGCGGCGCCGCGCGGCGCGCCATGCGATCCACAGCTTG CGGATCGGCGTGAGCGCGAT
Product: twin-arginine translocation pathway signal sequence domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MRNEEGSMKRRDFLALASLAGAAGVSLPVPYAFAAAPGETSATGAMGAVGAARAARYSNLLILVELKGGNDGLNTVIPYA NPLYRTLRPAIGVKREQVVQLDERAALHPALEPLMPIWRDGRLAIVEGVGYPQPNLSHFRSIEIWDTASRANEYLREGWL TRAFAQASVPPGFAADGIVLGSAEMGPLANGARAIALVNPAQFARAARLAQPVSLRERNPALAHMIDIENDIVKAADRLR PHAGTPALATAFPGGPFGASVKTAMQVLAACDTPQRTPAPGQGVAVLRLTLNGFDTHQNQPGQQAGLLGQLAQGLVAMRS ALIELGRWNDTLVMTYAEFGRRARENQSNGTDHGTAAPHFVMGGRVRGGLYGAPPALDALDGNGNLPVAVDFRQLYATVL GPWWGLDAASVLRQRFEPLPLLRA
Sequences:
>Translated_424_residues MRNEEGSMKRRDFLALASLAGAAGVSLPVPYAFAAAPGETSATGAMGAVGAARAARYSNLLILVELKGGNDGLNTVIPYA NPLYRTLRPAIGVKREQVVQLDERAALHPALEPLMPIWRDGRLAIVEGVGYPQPNLSHFRSIEIWDTASRANEYLREGWL TRAFAQASVPPGFAADGIVLGSAEMGPLANGARAIALVNPAQFARAARLAQPVSLRERNPALAHMIDIENDIVKAADRLR PHAGTPALATAFPGGPFGASVKTAMQVLAACDTPQRTPAPGQGVAVLRLTLNGFDTHQNQPGQQAGLLGQLAQGLVAMRS ALIELGRWNDTLVMTYAEFGRRARENQSNGTDHGTAAPHFVMGGRVRGGLYGAPPALDALDGNGNLPVAVDFRQLYATVL GPWWGLDAASVLRQRFEPLPLLRA >Mature_424_residues MRNEEGSMKRRDFLALASLAGAAGVSLPVPYAFAAAPGETSATGAMGAVGAARAARYSNLLILVELKGGNDGLNTVIPYA NPLYRTLRPAIGVKREQVVQLDERAALHPALEPLMPIWRDGRLAIVEGVGYPQPNLSHFRSIEIWDTASRANEYLREGWL TRAFAQASVPPGFAADGIVLGSAEMGPLANGARAIALVNPAQFARAARLAQPVSLRERNPALAHMIDIENDIVKAADRLR PHAGTPALATAFPGGPFGASVKTAMQVLAACDTPQRTPAPGQGVAVLRLTLNGFDTHQNQPGQQAGLLGQLAQGLVAMRS ALIELGRWNDTLVMTYAEFGRRARENQSNGTDHGTAAPHFVMGGRVRGGLYGAPPALDALDGNGNLPVAVDFRQLYATVL GPWWGLDAASVLRQRFEPLPLLRA
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44982; Mature: 44982
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNEEGSMKRRDFLALASLAGAAGVSLPVPYAFAAAPGETSATGAMGAVGAARAARYSNL CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCE LILVELKGGNDGLNTVIPYANPLYRTLRPAIGVKREQVVQLDERAALHPALEPLMPIWRD EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC GRLAIVEGVGYPQPNLSHFRSIEIWDTASRANEYLREGWLTRAFAQASVPPGFAADGIVL CCEEEEECCCCCCCCHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE GSAEMGPLANGARAIALVNPAQFARAARLAQPVSLRERNPALAHMIDIENDIVKAADRLR CCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCHHCCCCCCEEEECCHHHHHHHHHHHC PHAGTPALATAFPGGPFGASVKTAMQVLAACDTPQRTPAPGQGVAVLRLTLNGFDTHQNQ CCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC PGQQAGLLGQLAQGLVAMRSALIELGRWNDTLVMTYAEFGRRARENQSNGTDHGTAAPHF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCE VMGGRVRGGLYGAPPALDALDGNGNLPVAVDFRQLYATVLGPWWGLDAASVLRQRFEPLP EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHCCCCC LLRA CCCC >Mature Secondary Structure MRNEEGSMKRRDFLALASLAGAAGVSLPVPYAFAAAPGETSATGAMGAVGAARAARYSNL CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCE LILVELKGGNDGLNTVIPYANPLYRTLRPAIGVKREQVVQLDERAALHPALEPLMPIWRD EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC GRLAIVEGVGYPQPNLSHFRSIEIWDTASRANEYLREGWLTRAFAQASVPPGFAADGIVL CCEEEEECCCCCCCCHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE GSAEMGPLANGARAIALVNPAQFARAARLAQPVSLRERNPALAHMIDIENDIVKAADRLR CCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCHHCCCCCCEEEECCHHHHHHHHHHHC PHAGTPALATAFPGGPFGASVKTAMQVLAACDTPQRTPAPGQGVAVLRLTLNGFDTHQNQ CCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC PGQQAGLLGQLAQGLVAMRSALIELGRWNDTLVMTYAEFGRRARENQSNGTDHGTAAPHF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCE VMGGRVRGGLYGAPPALDALDGNGNLPVAVDFRQLYATVLGPWWGLDAASVLRQRFEPLP EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHCCCCC LLRA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA