| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812704
Identifier: 237812704
GI number: 237812704
Start: 2402599
End: 2403324
Strand: Direct
Name: 237812704
Synonym: GBP346_A2456
Alternate gene names: NA
Gene position: 2402599-2403324 (Clockwise)
Preceding gene: 237812703
Following gene: 237812707
Centisome position: 58.62
GC content: 58.13
Gene sequence:
>726_bases ATGGAAATCAATACGATGTTCCGGGACACGACTCTGTCGTCCCGTGACTATGAAGAGATGCTCGCACGTGAATCGCGACT CGTCGACTTGCTATCGACGAAAAGTCCGACAATGGCGCGTGCCAATTGGCGCTTAACGGGCGACACTCTAGAAGAGGCAA ATAGCTACCCTGCCTTTGAGGCCAATGGAGCACCGTCCACGCCCGCGCTCGCGGTCTTGACAGAGCGAGGTCGCGGAAAC AAACACGGTGTGTCGCATGCTGCGATCTGGAACGCCGCAACGAGCGCCGAGGAAGGTGCGTCAATCTCTTGCCACGTATC GGACGCGAAGGTGCTTCCCGATACGTTGAGCGTGAGTTTGCGCGTGCCGGGCTGTTACGCCACCGCAGACGATTTTGCCG ATGTGATCAAGGCGATCGTCGCCGCATTCCATCCCGCCGTAATAGAAGCATCACCAGACGGGTATTTCGAAAAACAGGTC TTCGATGACAAACCCGGCGTTGGCTGGATGCTCTACCTACCGAAGATCATCACGCAACAACAGGTTCCGGAAGCACACGC CCTGATACCTGTTCCGGAGGCAGGCAAGCGCCAGACCGGCACGATCATCGTCAGCGTCACGGACGCCCCGTTCTCGGTCG ACAATCCCGAGCACGTCGCGATCGCGAACCGCATCGAGATCCGGCTCGTCGATCAAGACTTGCTCCCCGCCTACGTCGAT ATCTGA
Upstream 100 bases:
>100_bases ACGTCTGATGTGGTACTTTGCGACGCCGCTTGCTCAAAAAAAGATGGCCACGGCGCTTGCTCGTATGGGTATTCCGTCCG TCTATCAACCGTGATCGAAT
Downstream 100 bases:
>100_bases AGCTGAACCCGCCGGCGCGATTACCGCGCCGGCCGCACGCGTCCAAACAATCCGACTGGCTCCGCCGAGTCGCCCCAACT AAAAGTAATCCGCTCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MEINTMFRDTTLSSRDYEEMLARESRLVDLLSTKSPTMARANWRLTGDTLEEANSYPAFEANGAPSTPALAVLTERGRGN KHGVSHAAIWNAATSAEEGASISCHVSDAKVLPDTLSVSLRVPGCYATADDFADVIKAIVAAFHPAVIEASPDGYFEKQV FDDKPGVGWMLYLPKIITQQQVPEAHALIPVPEAGKRQTGTIIVSVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVD I
Sequences:
>Translated_241_residues MEINTMFRDTTLSSRDYEEMLARESRLVDLLSTKSPTMARANWRLTGDTLEEANSYPAFEANGAPSTPALAVLTERGRGN KHGVSHAAIWNAATSAEEGASISCHVSDAKVLPDTLSVSLRVPGCYATADDFADVIKAIVAAFHPAVIEASPDGYFEKQV FDDKPGVGWMLYLPKIITQQQVPEAHALIPVPEAGKRQTGTIIVSVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVD I >Mature_241_residues MEINTMFRDTTLSSRDYEEMLARESRLVDLLSTKSPTMARANWRLTGDTLEEANSYPAFEANGAPSTPALAVLTERGRGN KHGVSHAAIWNAATSAEEGASISCHVSDAKVLPDTLSVSLRVPGCYATADDFADVIKAIVAAFHPAVIEASPDGYFEKQV FDDKPGVGWMLYLPKIITQQQVPEAHALIPVPEAGKRQTGTIIVSVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVD I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26132; Mature: 26132
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINTMFRDTTLSSRDYEEMLARESRLVDLLSTKSPTMARANWRLTGDTLEEANSYPAFE CCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECEEEEECCHHHHCCCCCCEE ANGAPSTPALAVLTERGRGNKHGVSHAAIWNAATSAEEGASISCHVSDAKVLPDTLSVSL CCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCEECCCEEEEEE RVPGCYATADDFADVIKAIVAAFHPAVIEASPDGYFEKQVFDDKPGVGWMLYLPKIITQQ ECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHCCCCCCCCCEEHHHHHHHHH QVPEAHALIPVPEAGKRQTGTIIVSVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVD CCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHC I C >Mature Secondary Structure MEINTMFRDTTLSSRDYEEMLARESRLVDLLSTKSPTMARANWRLTGDTLEEANSYPAFE CCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECEEEEECCHHHHCCCCCCEE ANGAPSTPALAVLTERGRGNKHGVSHAAIWNAATSAEEGASISCHVSDAKVLPDTLSVSL CCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCEECCCEEEEEE RVPGCYATADDFADVIKAIVAAFHPAVIEASPDGYFEKQVFDDKPGVGWMLYLPKIITQQ ECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHCCCCCCCCCEEHHHHHHHHH QVPEAHALIPVPEAGKRQTGTIIVSVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVD CCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA