| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812700
Identifier: 237812700
GI number: 237812700
Start: 2400723
End: 2401145
Strand: Direct
Name: 237812700
Synonym: GBP346_A2452
Alternate gene names: NA
Gene position: 2400723-2401145 (Clockwise)
Preceding gene: 237812698
Following gene: 237812701
Centisome position: 58.57
GC content: 71.16
Gene sequence:
>423_bases GTGGTCAAGCGCGCGATCATCTGCGTCGGCGACACGACGACACACGGCGGCAAGGTGCTCGAAGGCGCGCCGACGTTCAC GCTCAACGGACGCAATGTGGCCGGCGTCGGCCACCAGGTACTTTGTCCTCGCTGCAAGGGCATTTTCCCGATCCTTCCCG ACCTGCTCGGCCGCCGCTACCCGCACACGATCGGCGAGCGCGACACCGCCGTCGAGGGCATGCGCACGGCCTGCGGCGCG GAGTTGATCGCATCGCAGGGCACCGGAACGATCGACGACGTCGGCGCGGGCGAGCGCGGGGACGGCGGCTCACCCGGCGG ATCGGCAGCCGCGGCGGCGGCCGTCGCCCCTTCCCCCACGCTCTGCCTCGAATGCCTGAAGGCGGCGGCCAAGAAGGCCG CGACGATGGTCGCACGCGGATGA
Upstream 100 bases:
>100_bases CTGGCAGAACTGACAGGTGTCGTGACTGCACAACCGTAACAGTCGCCCGCCGGGCGCGCTCGATGGTAAATTTGCACGCC AATTTCCATGAGAGGGCCCA
Downstream 100 bases:
>100_bases TGACGCCACCGAATATCGAAGCGCATTTCGAGATGCGCCGCCAGCAGATCACGCTGCCCGCGCGGCTTTTCGCGGTGATC GACGCGCTGCTCTTCGCCGA
Product: PAAR motif protein
Products: NA
Alternate protein names: PAAR Motif Family; PaaR Motif-Containing Protein; Paar Repeat-Containing Protein; PAAR Motif-Containing Protein; Bacteriophage
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAVAPSPTLCLECLKAAAKKAATMVARG
Sequences:
>Translated_140_residues MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAVAPSPTLCLECLKAAAKKAATMVARG >Mature_140_residues MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAVAPSPTLCLECLKAAAKKAATMVARG
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14025; Mature: 14025
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRY CCCCEEEEECCCCCCCCEEECCCCEEEECCCEECCCCCCCCCCCCCCCCHHHHHHHCCCC PHTIGERDTAVEGMRTACGAELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAVAPSPT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH LCLECLKAAAKKAATMVARG HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRY CCCCEEEEECCCCCCCCEEECCCCEEEECCCEECCCCCCCCCCCCCCCCHHHHHHHCCCC PHTIGERDTAVEGMRTACGAELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAVAPSPT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH LCLECLKAAAKKAATMVARG HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA