| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812673
Identifier: 237812673
GI number: 237812673
Start: 2378522
End: 2378773
Strand: Reverse
Name: 237812673
Synonym: GBP346_A2424
Alternate gene names: NA
Gene position: 2378773-2378522 (Counterclockwise)
Preceding gene: 237812675
Following gene: 237812672
Centisome position: 58.04
GC content: 63.89
Gene sequence:
>252_bases ATGGGCAAGACCTATCCCGAGCGCTATCACGAATTTCAGCTGACGCCGGGCAAGCTGGCGAATAGCCCGCTCGGGTCGAC GCTCGACGGATTCTTCCGCATGGATCAGCCGGCGCTCGCGGCAAGCGGCGGATTGCGGTCGCAATCGGGGTCGCGACGCA ATGCGACGATTGCATCGGCTATTACATGCATGAAGCGTGGCGCGCGGGCGCATCCGATCACGAGGTGCTCGACGCCGCGG GCGTTGCGATAA
Upstream 100 bases:
>100_bases TGGTTTGCCGGATGAGTGTCGGCTTCGGCACGCGCGATGCGCCGTGGCGCGCGGCGCGGCAGGCTGCGGCCGTCGCTGGC GGGCTGCATGGAGGCCCACG
Downstream 100 bases:
>100_bases TGATGGGCGGCGAGCCGGCCGTCGTCTACGCATGCCCGGTCTACAAGGCACTCGAGCAGTTTTCGGCGGCGGCCGCCGTG CGACCCGATGCGGTGCTGGC
Product: 4-carboxymuconolactone decarboxylase domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MGKTYPERYHEFQLTPGKLANSPLGSTLDGFFRMDQPALAASGGLRSQSGSRRNATIASAITCMKRGARAHPITRCSTPR ALR
Sequences:
>Translated_83_residues MGKTYPERYHEFQLTPGKLANSPLGSTLDGFFRMDQPALAASGGLRSQSGSRRNATIASAITCMKRGARAHPITRCSTPR ALR >Mature_82_residues GKTYPERYHEFQLTPGKLANSPLGSTLDGFFRMDQPALAASGGLRSQSGSRRNATIASAITCMKRGARAHPITRCSTPRA LR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8993; Mature: 8862
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTYPERYHEFQLTPGKLANSPLGSTLDGFFRMDQPALAASGGLRSQSGSRRNATIASA CCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH ITCMKRGARAHPITRCSTPRALR HHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GKTYPERYHEFQLTPGKLANSPLGSTLDGFFRMDQPALAASGGLRSQSGSRRNATIASA CCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH ITCMKRGARAHPITRCSTPRALR HHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA