Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812631

Identifier: 237812631

GI number: 237812631

Start: 2336582

End: 2337169

Strand: Direct

Name: 237812631

Synonym: GBP346_A2381

Alternate gene names: NA

Gene position: 2336582-2337169 (Clockwise)

Preceding gene: 237812629

Following gene: 237812642

Centisome position: 57.01

GC content: 67.86

Gene sequence:

>588_bases
ATGCACAAACGCAATCTCGTGTTGAAAGCCGCCGCCGCGCTCGTCGTGGGCAGCCTGGCGCTCGCCGGTTGCACGACGAC
GCCGGACAAGCCCGCCAATGCCGCGACCAACGCGTCGAAGCGTCAAGCCATCGATGCGAGCGTCGACGCGACGCTGTCGC
GCCTGTACTCGACGGTGCGCGGCTCGCGCGAACTCGTCGCGAAGTCGCGCGGCGTGCTCGTGTTCCCGGACGTGATCCAG
GCAGGCCTCATCATCGGCGGCCAGACCGGCAACGGCGCACTGCGCGTCGGCGGCGCTACGGTCGGCTACTACAACACGTC
GTCGCTGTCGGTCGGCCTGCAGGCGGGCGCGCAGTCGAAGGCGATCGTGTTCCTGTTCATGACGCAGGACGCGCTCGACA
AATTCCGCAACTCCGACGGCTGGGCGGCAGGCGCCGACGCATCGGTCGCGCTCGTGAAGATGGGCGCGAACGGCGCGATC
GACACGACGACGGCGACCGCCCCCGTCGAAGTGATCGTGCTGACGAACGCCGGCCTGATGGGCGACGTGTCGATCAGCGG
CACGAAGGTCACGAAGCTGAAGATCTGA

Upstream 100 bases:

>100_bases
CTTACAGCAGTAAGGCAGGGTACTTCGCTGTGTTATAAAGTCCCGCGTGACACGCCCGTTCGCGGGCATCACGCTGATCT
ACACTTGATGGAGAAAAACG

Downstream 100 bases:

>100_bases
CGCCCGCGCGGATGACCGGCGCGCCGAGGGCGAACGGCGGCCGACGCGAGAACGGCGATGCGCTTGACGCGCATCGCCGT
TTTTTTTTGGGCGAAGCCGC

Product: putative lipoprotein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MHKRNLVLKAAAALVVGSLALAGCTTTPDKPANAATNASKRQAIDASVDATLSRLYSTVRGSRELVAKSRGVLVFPDVIQ
AGLIIGGQTGNGALRVGGATVGYYNTSSLSVGLQAGAQSKAIVFLFMTQDALDKFRNSDGWAAGADASVALVKMGANGAI
DTTTATAPVEVIVLTNAGLMGDVSISGTKVTKLKI

Sequences:

>Translated_195_residues
MHKRNLVLKAAAALVVGSLALAGCTTTPDKPANAATNASKRQAIDASVDATLSRLYSTVRGSRELVAKSRGVLVFPDVIQ
AGLIIGGQTGNGALRVGGATVGYYNTSSLSVGLQAGAQSKAIVFLFMTQDALDKFRNSDGWAAGADASVALVKMGANGAI
DTTTATAPVEVIVLTNAGLMGDVSISGTKVTKLKI
>Mature_195_residues
MHKRNLVLKAAAALVVGSLALAGCTTTPDKPANAATNASKRQAIDASVDATLSRLYSTVRGSRELVAKSRGVLVFPDVIQ
AGLIIGGQTGNGALRVGGATVGYYNTSSLSVGLQAGAQSKAIVFLFMTQDALDKFRNSDGWAAGADASVALVKMGANGAI
DTTTATAPVEVIVLTNAGLMGDVSISGTKVTKLKI

Specific function: Unknown

COG id: COG2930

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19764; Mature: 19764

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKRNLVLKAAAALVVGSLALAGCTTTPDKPANAATNASKRQAIDASVDATLSRLYSTVR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHC
GSRELVAKSRGVLVFPDVIQAGLIIGGQTGNGALRVGGATVGYYNTSSLSVGLQAGAQSK
CCHHHHHHCCCEEEEHHHHHCCEEEECCCCCCEEEECCEEEEEEECCCEEEEEECCCCCC
AIVFLFMTQDALDKFRNSDGWAAGADASVALVKMGANGAIDTTTATAPVEVIVLTNAGLM
EEEEEEECHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCE
GDVSISGTKVTKLKI
EEEEECCCEEEEEEC
>Mature Secondary Structure
MHKRNLVLKAAAALVVGSLALAGCTTTPDKPANAATNASKRQAIDASVDATLSRLYSTVR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHC
GSRELVAKSRGVLVFPDVIQAGLIIGGQTGNGALRVGGATVGYYNTSSLSVGLQAGAQSK
CCHHHHHHCCCEEEEHHHHHCCEEEECCCCCCEEEECCEEEEEEECCCEEEEEECCCCCC
AIVFLFMTQDALDKFRNSDGWAAGADASVALVKMGANGAIDTTTATAPVEVIVLTNAGLM
EEEEEEECHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCE
GDVSISGTKVTKLKI
EEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA