| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812623
Identifier: 237812623
GI number: 237812623
Start: 2332530
End: 2333168
Strand: Direct
Name: 237812623
Synonym: GBP346_A2373
Alternate gene names: NA
Gene position: 2332530-2333168 (Clockwise)
Preceding gene: 237812622
Following gene: 237812624
Centisome position: 56.91
GC content: 66.82
Gene sequence:
>639_bases ATGGCGCATCGATGCAGCGAGGCGGCACGGCGAAGCGGCGCGTTGAGCCGACGCTGCGCGGCGCGCGCGGCGAAGCGGCA CCGTGAAGCGAGCGCGCCGATACGGCGCAGCGCAAGCGCCGCGAGCGCGAGCGGCTGCCGTATGGCCCGCACGTGCGCCG CCCGCCGCCTCGGGCGCACATCGGGCGTCGGCCGGCTCGACGCATTCCGCCCGCACGCGAATCGCCACACCCGATGCCGC GCATCTTCACCGCGGCCTCGATGTCTAACACGGCAACGAGTCGTCGACGTGACACTCGATGCAATCGAATCGATGCGCAT GCACGCATCGTCGATGGGGCGCCTCGCCGCGCGCATCATGCGCGCGGCAGGCAAACGAAGCCGCTTTCGGCTGAAAGCGG CAGGTGGGTCCGCAGCGGCACCCGGCGCCGACGGGGAAGCCTTGGTCGGTCAGACGTCGTCGTCGGGTGTCCGTCTGTCG GATTCGTCATCGTGCGTATTACATTTCTTTACGTTCGACGAAGCGATTTTTCATGCAATTTGCAACGCGAACGCCTACAC TTTCGCGACGCCTTTCGGCAAGCGCGCGCATCGCCCGCGCTTGCCGCAACTTCACGGCGCATTTTTGTCAATCACCTGA
Upstream 100 bases:
>100_bases CGACAAGAAGGTGGCGTGAGCGAACGCATCGGCGCGGCGTGTCGCGCCGATGCGGGGAAGCGGTGGAGTCGGCGACGGCG TGCAGTGGCGGCGTGTCGGT
Downstream 100 bases:
>100_bases AGGAGTGTTGCGATGGGTCTTCTTTCGTTCATCAAGGAAGCGGGTGAAAAGCTGCTCGGCAAGAGCGACGAGCAAGCCGC GACCGATCCGGCCGCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MAHRCSEAARRSGALSRRCAARAAKRHREASAPIRRSASAASASGCRMARTCAARRLGRTSGVGRLDAFRPHANRHTRCR ASSPRPRCLTRQRVVDVTLDAIESMRMHASSMGRLAARIMRAAGKRSRFRLKAAGGSAAAPGADGEALVGQTSSSGVRLS DSSSCVLHFFTFDEAIFHAICNANAYTFATPFGKRAHRPRLPQLHGAFLSIT
Sequences:
>Translated_212_residues MAHRCSEAARRSGALSRRCAARAAKRHREASAPIRRSASAASASGCRMARTCAARRLGRTSGVGRLDAFRPHANRHTRCR ASSPRPRCLTRQRVVDVTLDAIESMRMHASSMGRLAARIMRAAGKRSRFRLKAAGGSAAAPGADGEALVGQTSSSGVRLS DSSSCVLHFFTFDEAIFHAICNANAYTFATPFGKRAHRPRLPQLHGAFLSIT >Mature_211_residues AHRCSEAARRSGALSRRCAARAAKRHREASAPIRRSASAASASGCRMARTCAARRLGRTSGVGRLDAFRPHANRHTRCRA SSPRPRCLTRQRVVDVTLDAIESMRMHASSMGRLAARIMRAAGKRSRFRLKAAGGSAAAPGADGEALVGQTSSSGVRLSD SSSCVLHFFTFDEAIFHAICNANAYTFATPFGKRAHRPRLPQLHGAFLSIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22815; Mature: 22684
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRCSEAARRSGALSRRCAARAAKRHREASAPIRRSASAASASGCRMARTCAARRLGRT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHCC SGVGRLDAFRPHANRHTRCRASSPRPRCLTRQRVVDVTLDAIESMRMHASSMGRLAARIM CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAGKRSRFRLKAAGGSAAAPGADGEALVGQTSSSGVRLSDSSSCVLHFFTFDEAIFHAI HHHCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCEEECCCCCEEEEEEHHHHHHHHHH CNANAYTFATPFGKRAHRPRLPQLHGAFLSIT HCCCCEEEECCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure AHRCSEAARRSGALSRRCAARAAKRHREASAPIRRSASAASASGCRMARTCAARRLGRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHCC SGVGRLDAFRPHANRHTRCRASSPRPRCLTRQRVVDVTLDAIESMRMHASSMGRLAARIM CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAGKRSRFRLKAAGGSAAAPGADGEALVGQTSSSGVRLSDSSSCVLHFFTFDEAIFHAI HHHCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCEEECCCCCEEEEEEHHHHHHHHHH CNANAYTFATPFGKRAHRPRLPQLHGAFLSIT HCCCCEEEECCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA