| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812617
Identifier: 237812617
GI number: 237812617
Start: 2326199
End: 2327119
Strand: Direct
Name: 237812617
Synonym: GBP346_A2367
Alternate gene names: NA
Gene position: 2326199-2327119 (Clockwise)
Preceding gene: 237812616
Following gene: 237812618
Centisome position: 56.76
GC content: 70.58
Gene sequence:
>921_bases ATGCCGAATCCCATCCAACCCTTGAAACGGCGCGATTTCCTGCGCCTTGCCGCCTGCGGCGGCGGCGTCGCGTTCGCTTC CGCGCTGCCCGGCTGGAGCTTCGCCGCGAACGCCGGCGCGGATTTCTTCTTCGTCCAGCTCTCCGACGCGCACTGGGGCT TCACCGGCCCCGCGATCAACCCCGACGCGCGCGGCACGCTGCCGAAGGCGATCGAGGCCGTCAACGCGCTGCCCGTCGCG CCCGACTTCGTGATGTTCACGGGCGATCTGACGCACACGACCGACGATCCGGCCGAGCGCCGCGCACGGATGCGGCAGTT TCAGTCGATCGTCGCGCAACTGCGGGCGAAGCCGCTGCACCTGATGCCGGGCGAGCACGACGCGAGCCTCGATGCAGGCG CCGCGTACCGCGAGATCTTCGGCGACACCCATTACGCGTTCGATCACAAGGGCGTGCATTTCGTCGTCGTCGACAACGTG TCGGATCCGGCCGGCCGCGTCGGCGACGCGCAGATCGAATGGCTCGCGCGGGATCTCGCGCGACAGCCGAAGGACGCGCG CATCGTCGTCTTCACGCACCGGCCGCTCTTCGATCTCGCGCCGCAATGGGACTGGGCCACGCGCGACGGCGCGAAGGTCG TCGACGTGCTGATGCCCTATCCGAACGTCACCGTGTTCTACGGACACATCCATCAGGAGCACCACGCGATGACGGGCCAC ATCGCGCACCACGCGGCGCGCTCGCTGATGTTTCCGCTGCCCGCGCCCGGCTCGCAGGACAAGCGCCTGCCGGTGCCGTG GGACGCCGCCGCGCCGTATCGCGGGCTCGGCTGGCGCGAAGTGCGCGTCGGCGACGCGGCGCGCGCGCCCGCGTTGACCG AGATGCCCGTCGCCGCGCCCCAACCGCAACCGCGCGCCTGA
Upstream 100 bases:
>100_bases GTTTATTCCCGCGATCCACGCCCGGAGACAAAAAATAAACCGGGAATATCCGCGCGGCGACGGCGGTATTGCATGCACCC CCACTTGCGAAGGAGCCGCC
Downstream 100 bases:
>100_bases GGAGACTGCGATGCGCCATTTTTTCTTCGATCCGCGCGCGCTCCGCGGCCGGGCTCGCGCGAGCGCGCCGTCCTGGCTGC GCCGCCGCTGGCTCTTCGCC
Product: Ser/Thr protein phosphatase family protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Twin-Arginine Translocation Pathway Signal; Secreted Phosphohydrolase; Xylosidase/Arabinosidase; Metallophosphoesterase/Phosphohydrolase Protein
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MPNPIQPLKRRDFLRLAACGGGVAFASALPGWSFAANAGADFFFVQLSDAHWGFTGPAINPDARGTLPKAIEAVNALPVA PDFVMFTGDLTHTTDDPAERRARMRQFQSIVAQLRAKPLHLMPGEHDASLDAGAAYREIFGDTHYAFDHKGVHFVVVDNV SDPAGRVGDAQIEWLARDLARQPKDARIVVFTHRPLFDLAPQWDWATRDGAKVVDVLMPYPNVTVFYGHIHQEHHAMTGH IAHHAARSLMFPLPAPGSQDKRLPVPWDAAAPYRGLGWREVRVGDAARAPALTEMPVAAPQPQPRA
Sequences:
>Translated_306_residues MPNPIQPLKRRDFLRLAACGGGVAFASALPGWSFAANAGADFFFVQLSDAHWGFTGPAINPDARGTLPKAIEAVNALPVA PDFVMFTGDLTHTTDDPAERRARMRQFQSIVAQLRAKPLHLMPGEHDASLDAGAAYREIFGDTHYAFDHKGVHFVVVDNV SDPAGRVGDAQIEWLARDLARQPKDARIVVFTHRPLFDLAPQWDWATRDGAKVVDVLMPYPNVTVFYGHIHQEHHAMTGH IAHHAARSLMFPLPAPGSQDKRLPVPWDAAAPYRGLGWREVRVGDAARAPALTEMPVAAPQPQPRA >Mature_305_residues PNPIQPLKRRDFLRLAACGGGVAFASALPGWSFAANAGADFFFVQLSDAHWGFTGPAINPDARGTLPKAIEAVNALPVAP DFVMFTGDLTHTTDDPAERRARMRQFQSIVAQLRAKPLHLMPGEHDASLDAGAAYREIFGDTHYAFDHKGVHFVVVDNVS DPAGRVGDAQIEWLARDLARQPKDARIVVFTHRPLFDLAPQWDWATRDGAKVVDVLMPYPNVTVFYGHIHQEHHAMTGHI AHHAARSLMFPLPAPGSQDKRLPVPWDAAAPYRGLGWREVRVGDAARAPALTEMPVAAPQPQPRA
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33537; Mature: 33406
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNPIQPLKRRDFLRLAACGGGVAFASALPGWSFAANAGADFFFVQLSDAHWGFTGPAIN CCCCCCHHHHHCCEEEEECCCCHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCCCCCCC PDARGTLPKAIEAVNALPVAPDFVMFTGDLTHTTDDPAERRARMRQFQSIVAQLRAKPLH CCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE LMPGEHDASLDAGAAYREIFGDTHYAFDHKGVHFVVVDNVSDPAGRVGDAQIEWLARDLA ECCCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH RQPKDARIVVFTHRPLFDLAPQWDWATRDGAKVVDVLMPYPNVTVFYGHIHQEHHAMTGH CCCCCCEEEEEECCCHHHCCCCCCCCCCCCCCEEHHHCCCCCEEEEEEEHHHHHHHHHHH IAHHAARSLMFPLPAPGSQDKRLPVPWDAAAPYRGLGWREVRVGDAARAPALTEMPVAAP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC QPQPRA CCCCCC >Mature Secondary Structure PNPIQPLKRRDFLRLAACGGGVAFASALPGWSFAANAGADFFFVQLSDAHWGFTGPAIN CCCCCHHHHHCCEEEEECCCCHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCCCCCCC PDARGTLPKAIEAVNALPVAPDFVMFTGDLTHTTDDPAERRARMRQFQSIVAQLRAKPLH CCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE LMPGEHDASLDAGAAYREIFGDTHYAFDHKGVHFVVVDNVSDPAGRVGDAQIEWLARDLA ECCCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH RQPKDARIVVFTHRPLFDLAPQWDWATRDGAKVVDVLMPYPNVTVFYGHIHQEHHAMTGH CCCCCCEEEEEECCCHHHCCCCCCCCCCCCCCEEHHHCCCCCEEEEEEEHHHHHHHHHHH IAHHAARSLMFPLPAPGSQDKRLPVPWDAAAPYRGLGWREVRVGDAARAPALTEMPVAAP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC QPQPRA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA