| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812588
Identifier: 237812588
GI number: 237812588
Start: 2301863
End: 2302654
Strand: Reverse
Name: 237812588
Synonym: GBP346_A2338
Alternate gene names: NA
Gene position: 2302654-2301863 (Counterclockwise)
Preceding gene: 237812589
Following gene: 237812587
Centisome position: 56.18
GC content: 72.35
Gene sequence:
>792_bases GTGCCGGCGGCGGGGCGGCGCCGCGCGATATCGTTGTCGCTGTCGCTGTCGCTGTCGTTCGCCGGGCCGGCGCCCGTTCG GCCGCCGGCCGGCATCGGTCCGTCGCGCAGCGTGCCGCCTGCCCCCCATCGGCGGGCAGGCGGCACGCTGCGCGGTGTAG CGCGAAGCCGCCGGTGCGACGCGGTGACGCAGCGTTGCTGCGCCAAACGGCCGCTACACGGCCACCGCGCGATTCCGGCC GACCGGCGGCGCCTGCGGCGTGGGTTGCGGATCGCGGGTCGCGTTCGTCGGGTCCGTCGGGTCTGTTCCGTGCCGGCCCG GCCCGCCGTATCGGCGAGCGGGGCGGCCTGGGCGTGCCGCCCGATCGGCCGCTTGCGTCGTCGGTGGTTGTTCCGGCGGC TGTTTTTTCGATCGGTCGCCTGCGCACGCGTGGTTGCCGCGCGCGTCAAACGGATACCGAGCGGGATACCGAACGCGGCG AGCTTGACCGATCGCGCCGCCGCGATCTCGGGTGATGCACCGATTGCCGTTCATCGCATGCGAACGGTGGGCCGCGATTC GTCGGAAATCATCGCCATTCACCGCCATCCGCCGCGATGCGTGACGATGCGCGGCGCTCGTGCGCCGCGCGGGCGCGAAT CGGCGCGGGCGCGAATCGTTGCGATCGGTCGCTCACATCCGCGCGAAGGCGTCGCTACAATGTCGCCATCCGGTCAACAT TTCAATCGACGATGTCCCACCCCACTCCCCAGACGCCGCGCGCGCCGATGCTGTCGACGGCCGATGCGCTGA
Upstream 100 bases:
>100_bases CGGGCTCGAGGCGCTGCCGCAGCGCTTCGAGGTGGTCGACGCGAGCGCGCAGCAGGTGAAGGACTTCATCGCCGCGCACA CGGGCGCATGATGGCGTGAT
Downstream 100 bases:
>100_bases CGGCGCTGCTCGCGGCGGCGCGTCCGCTCGCCGAGATTGAAACCGTGCCGACGCTCGAGGCGCTCAACCGCGTGCTCGCG GCCGACGTCGCGTCCGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPAAGRRRAISLSLSLSLSFAGPAPVRPPAGIGPSRSVPPAPHRRAGGTLRGVARSRRCDAVTQRCCAKRPLHGHRAIPA DRRRLRRGLRIAGRVRRVRRVCSVPARPAVSASGAAWACRPIGRLRRRWLFRRLFFRSVACARVVAARVKRIPSGIPNAA SLTDRAAAISGDAPIAVHRMRTVGRDSSEIIAIHRHPPRCVTMRGARAPRGRESARARIVAIGRSHPREGVATMSPSGQH FNRRCPTPLPRRRARRCCRRPMR
Sequences:
>Translated_263_residues MPAAGRRRAISLSLSLSLSFAGPAPVRPPAGIGPSRSVPPAPHRRAGGTLRGVARSRRCDAVTQRCCAKRPLHGHRAIPA DRRRLRRGLRIAGRVRRVRRVCSVPARPAVSASGAAWACRPIGRLRRRWLFRRLFFRSVACARVVAARVKRIPSGIPNAA SLTDRAAAISGDAPIAVHRMRTVGRDSSEIIAIHRHPPRCVTMRGARAPRGRESARARIVAIGRSHPREGVATMSPSGQH FNRRCPTPLPRRRARRCCRRPMR >Mature_262_residues PAAGRRRAISLSLSLSLSFAGPAPVRPPAGIGPSRSVPPAPHRRAGGTLRGVARSRRCDAVTQRCCAKRPLHGHRAIPAD RRRLRRGLRIAGRVRRVRRVCSVPARPAVSASGAAWACRPIGRLRRRWLFRRLFFRSVACARVVAARVKRIPSGIPNAAS LTDRAAAISGDAPIAVHRMRTVGRDSSEIIAIHRHPPRCVTMRGARAPRGRESARARIVAIGRSHPREGVATMSPSGQHF NRRCPTPLPRRRARRCCRRPMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28957; Mature: 28825
Theoretical pI: Translated: 12.84; Mature: 12.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAGRRRAISLSLSLSLSFAGPAPVRPPAGIGPSRSVPPAPHRRAGGTLRGVARSRRCD CCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AVTQRCCAKRPLHGHRAIPADRRRLRRGLRIAGRVRRVRRVCSVPARPAVSASGAAWACR HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH PIGRLRRRWLFRRLFFRSVACARVVAARVKRIPSGIPNAASLTDRAAAISGDAPIAVHRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHH RTVGRDSSEIIAIHRHPPRCVTMRGARAPRGRESARARIVAIGRSHPREGVATMSPSGQH HHHCCCCCCEEEEECCCCCEEEECCCCCCCCCHHHCEEEEEECCCCCCCCCEECCCCCCC FNRRCPTPLPRRRARRCCRRPMR CCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure PAAGRRRAISLSLSLSLSFAGPAPVRPPAGIGPSRSVPPAPHRRAGGTLRGVARSRRCD CCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AVTQRCCAKRPLHGHRAIPADRRRLRRGLRIAGRVRRVRRVCSVPARPAVSASGAAWACR HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH PIGRLRRRWLFRRLFFRSVACARVVAARVKRIPSGIPNAASLTDRAAAISGDAPIAVHRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHH RTVGRDSSEIIAIHRHPPRCVTMRGARAPRGRESARARIVAIGRSHPREGVATMSPSGQH HHHCCCCCCEEEEECCCCCEEEECCCCCCCCCHHHCEEEEEECCCCCCCCCEECCCCCCC FNRRCPTPLPRRRARRCCRRPMR CCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA