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The map label for this gene is 237812470

Identifier: 237812470

GI number: 237812470

Start: 2180035

End: 2181060

Strand: Reverse

Name: 237812470

Synonym: GBP346_A2219

Alternate gene names: NA

Gene position: 2181060-2180035 (Counterclockwise)

Preceding gene: 237812472

Following gene: 237812468

Centisome position: 53.22

GC content: 70.37

Gene sequence:

>1026_bases
ATGCCGATGCGCCACGCCGCCGCGCGCGCGGTTCTCGCCGCCGCATTCACGATCACGCTCGCCGCCGCGCCCGCAGGCGC
GCGGGCCGCGCCGCCGCTGCCCGCGCTGCGCGCGGACGCGAATCGCGTCTCGGTATCCGGTTTGTCGTCGGGCGCGTACA
TGGCGCTCCAGTATCAGGTCGCGTATTCGGCGTCGGTGGTCGGCGTCGGCGTGATCGCGGGCGGCCCGTACTATTGCGCG
GCGGGCAGCGTCGCGAACACGGATCTCTGCCGGGGGCTCGTGCCCAACATGGTGCCGGATTCGGGGCGGCTCGTCGCGGC
CGCGCAGGGCTTCGCCGCGAGCGGGCAGATCGATCCGCTCGCGAACCTGCAGCGCGCGAGAATCTATCTGTTCAGCGGAA
CGAAGGACACGCTCGTCCGCCAATCGGCCGTCGACGCGACGTGGTCGTTTTTCTGGCTCGTCGGCGTGCCCGTGACGAAC
ATCGTGTACGTCGCCGACGTCCCGGCCGGTCATGCATTCGTCACGCCGTCCGCGGGCAACGCGTGCGACGCGAACGCCGC
GCCGTTCATCAGCCATTGCACGGTCGGGCAATCGGGCTACGATCAGGCGGGCGCGCTGCTCGACGCGATTTACGGGCCGC
TCGCGCCGCCCGCCGCGACGCCGACGGGACGCGCGATCGCGTTCGACCAGCGCGAGTTCGCGCCGGCGTCGAGCGGACTC
GCGGCGCAAGGCTATGCGTATGTGCCGCGCACGTGCGACGCGAATGCCGGCTGCAAGGTGCACGTCGTGTTTCACGGCTG
CCTGCAGTCCGCCGCCGTCGTGCGCGACATGACGACGTACGATAACTGGGCCGACGCGAACGGCATCGTCGTGCTGTATC
CGCAGGTGGCGAAGACGAGCACGCCGAACGATCCGCAGGGATGCTGGGACTGGTTCGCGTACACCGGGCAGAACTACGCG
TGGAAGTCGGGTGCGCAGATGCGCGCGGTGAGGGCGATGATCGAGCGGGTCACGTCCGCGCCGTGA

Upstream 100 bases:

>100_bases
GATGAAGTGAACGCGTCTCGATTTGCCGTCCGACCGTGTCGACCCGTCCCGGCGGCGCCGGCCTCGCCGCCGCCGCCCGG
CGCAGACCAAGGGGAAAGCC

Downstream 100 bases:

>100_bases
CGCTCGGGCGCGGCGCGTTCGCCGGGCGGGGAAGCAGGGGCGGGCGTTCGTGCGCATCGGCGGGCGGGGCTGGCCGGGTC
CCGCGGGCGATCGATCGGGT

Product: polyhydroxybutyrate depolymerase

Products: NA

Alternate protein names: Depolymerase; Polyhydroxybutyrate Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Fibronectin Type III Domain-Containing Protein; Poly Depolymerase Protein; Fibronectin Type III Domain Protein; PHB Depolymerase

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MPMRHAAARAVLAAAFTITLAAAPAGARAAPPLPALRADANRVSVSGLSSGAYMALQYQVAYSASVVGVGVIAGGPYYCA
AGSVANTDLCRGLVPNMVPDSGRLVAAAQGFAASGQIDPLANLQRARIYLFSGTKDTLVRQSAVDATWSFFWLVGVPVTN
IVYVADVPAGHAFVTPSAGNACDANAAPFISHCTVGQSGYDQAGALLDAIYGPLAPPAATPTGRAIAFDQREFAPASSGL
AAQGYAYVPRTCDANAGCKVHVVFHGCLQSAAVVRDMTTYDNWADANGIVVLYPQVAKTSTPNDPQGCWDWFAYTGQNYA
WKSGAQMRAVRAMIERVTSAP

Sequences:

>Translated_341_residues
MPMRHAAARAVLAAAFTITLAAAPAGARAAPPLPALRADANRVSVSGLSSGAYMALQYQVAYSASVVGVGVIAGGPYYCA
AGSVANTDLCRGLVPNMVPDSGRLVAAAQGFAASGQIDPLANLQRARIYLFSGTKDTLVRQSAVDATWSFFWLVGVPVTN
IVYVADVPAGHAFVTPSAGNACDANAAPFISHCTVGQSGYDQAGALLDAIYGPLAPPAATPTGRAIAFDQREFAPASSGL
AAQGYAYVPRTCDANAGCKVHVVFHGCLQSAAVVRDMTTYDNWADANGIVVLYPQVAKTSTPNDPQGCWDWFAYTGQNYA
WKSGAQMRAVRAMIERVTSAP
>Mature_340_residues
PMRHAAARAVLAAAFTITLAAAPAGARAAPPLPALRADANRVSVSGLSSGAYMALQYQVAYSASVVGVGVIAGGPYYCAA
GSVANTDLCRGLVPNMVPDSGRLVAAAQGFAASGQIDPLANLQRARIYLFSGTKDTLVRQSAVDATWSFFWLVGVPVTNI
VYVADVPAGHAFVTPSAGNACDANAAPFISHCTVGQSGYDQAGALLDAIYGPLAPPAATPTGRAIAFDQREFAPASSGLA
AQGYAYVPRTCDANAGCKVHVVFHGCLQSAAVVRDMTTYDNWADANGIVVLYPQVAKTSTPNDPQGCWDWFAYTGQNYAW
KSGAQMRAVRAMIERVTSAP

Specific function: Unknown

COG id: COG3509

COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35341; Mature: 35210

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMRHAAARAVLAAAFTITLAAAPAGARAAPPLPALRADANRVSVSGLSSGAYMALQYQV
CCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHCCCCEEEEECCCCCEEEEEEEEE
AYSASVVGVGVIAGGPYYCAAGSVANTDLCRGLVPNMVPDSGRLVAAAQGFAASGQIDPL
EECCEEEEEEEEECCCEEEECCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHH
ANLQRARIYLFSGTKDTLVRQSAVDATWSFFWLVGVPVTNIVYVADVPAGHAFVTPSAGN
HCCCEEEEEEEECCHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCCCEEECCCCCC
ACDANAAPFISHCTVGQSGYDQAGALLDAIYGPLAPPAATPTGRAIAFDQREFAPASSGL
CCCCCCCCCHHEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHCCCCCCCC
AAQGYAYVPRTCDANAGCKVHVVFHGCLQSAAVVRDMTTYDNWADANGIVVLYPQVAKTS
CCCCEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHCCC
TPNDPQGCWDWFAYTGQNYAWKSGAQMRAVRAMIERVTSAP
CCCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PMRHAAARAVLAAAFTITLAAAPAGARAAPPLPALRADANRVSVSGLSSGAYMALQYQV
CCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHCCCCEEEEECCCCCEEEEEEEEE
AYSASVVGVGVIAGGPYYCAAGSVANTDLCRGLVPNMVPDSGRLVAAAQGFAASGQIDPL
EECCEEEEEEEEECCCEEEECCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHH
ANLQRARIYLFSGTKDTLVRQSAVDATWSFFWLVGVPVTNIVYVADVPAGHAFVTPSAGN
HCCCEEEEEEEECCHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCCCEEECCCCCC
ACDANAAPFISHCTVGQSGYDQAGALLDAIYGPLAPPAATPTGRAIAFDQREFAPASSGL
CCCCCCCCCHHEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHCCCCCCCC
AAQGYAYVPRTCDANAGCKVHVVFHGCLQSAAVVRDMTTYDNWADANGIVVLYPQVAKTS
CCCCEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHCCC
TPNDPQGCWDWFAYTGQNYAWKSGAQMRAVRAMIERVTSAP
CCCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA