| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is corA [H]
Identifier: 237812456
GI number: 237812456
Start: 2170151
End: 2171128
Strand: Reverse
Name: corA [H]
Synonym: GBP346_A2205
Alternate gene names: 237812456
Gene position: 2171128-2170151 (Counterclockwise)
Preceding gene: 237812459
Following gene: 237812453
Centisome position: 52.97
GC content: 65.54
Gene sequence:
>978_bases ATGCTGATCAACTGCGCCGCGTATCAGGATGGCCGCAAACTGGCCGATATCGACATCGACGACATCAGCGACTACGTCGC GAAGCCCGAGTGCTTCGTCTGGGTCGCGCTGAAGGACCCGGAGCCGGACGAGATCGAGCGGATGGGCGAGGAGTTCGGCC TGCACGAGCTCGCGCTCGAGGACGCGCGCAAGGGCCATCAGCGCCCGAAGATCGAGGAGTACGGCGATGCGCTGTTCGCC GTGCTGCACACGGTCGAGATCGACGGGCAGGGCGAGCTTCAGGTGGGCGAGCTGAACGTGTTCGTCGGTCCGAACTATGT GCTGTCGATCCGCAGTCACACCGAGCAGGACTTCCGCGCGGTGCGCGCGCGCTGCGAACGCGAGCCGCATCTGCTGAAGG AGGGGGCCGCGTTCGTGTTCTACGCGCTGATGGACCAGGTCGTCGACCGCTATTTCCCGACGCTCGAGGCGCTCGGCGCC GAGCTGGAAGCGCTCGAGGACCGGATCTTCGAGAAGACGGGCACGGCCGCCGCCCGCGCGCTGATCGAGGATCTGTACAG GCTCAAGCGCCGGCTCGTGATGCTGCAGCAGCACACGGCGCCGCTCGTCGAGCCGCTCGCGAAACTCGTCGGCGGCCGCG TTCCGCAGGTCTGCGCGGGGATGGACCATTACTTCCGCGATGTCTACGATCATCTGCTGCGGATCGTGCGAACGATCGAA GGGCGGCGCGAGATGCTCGTCACCGCGATTCAGGTGAACCTCGGGATGATCTCGCTCGCGGAGAACGAAGTGACGAAGCG GCTCGGTTCGTTCGCCGCGCTGTTCGCGATCCCGACGATGATCGCCGGGATCTACGGGATGAACTTCAACAACATACCGG AGCTGCACTGGCGCTTCGGCTTCTACGTATGCCTCGGCGTGATGGCGGCCGCCGACCTGTTCCTCTGGCGGCGCTTCAGG AAGGCCGGCTGGCTGTGA
Upstream 100 bases:
>100_bases CATGACCAATATCGGCGGGCCGCGCAAGCGACGCGCGCCGGCCGGCGCGCGCGGGAGCGGCTAAACTGTGCGCCGGAATG GCTTCGAAACCCGTAACAGC
Downstream 100 bases:
>100_bases GCGGCGCTCACGCGGGCGCGGCGAGCTTGCCGATGACGACCATCCACGGCCGCACCCGCCAGCGCTTGACGAGGCCGTTC GCGACGTAGGGATCGGCCTG
Product: magnesium and cobalt transport protein CorA
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MLINCAAYQDGRKLADIDIDDISDYVAKPECFVWVALKDPEPDEIERMGEEFGLHELALEDARKGHQRPKIEEYGDALFA VLHTVEIDGQGELQVGELNVFVGPNYVLSIRSHTEQDFRAVRARCEREPHLLKEGAAFVFYALMDQVVDRYFPTLEALGA ELEALEDRIFEKTGTAAARALIEDLYRLKRRLVMLQQHTAPLVEPLAKLVGGRVPQVCAGMDHYFRDVYDHLLRIVRTIE GRREMLVTAIQVNLGMISLAENEVTKRLGSFAALFAIPTMIAGIYGMNFNNIPELHWRFGFYVCLGVMAAADLFLWRRFR KAGWL
Sequences:
>Translated_325_residues MLINCAAYQDGRKLADIDIDDISDYVAKPECFVWVALKDPEPDEIERMGEEFGLHELALEDARKGHQRPKIEEYGDALFA VLHTVEIDGQGELQVGELNVFVGPNYVLSIRSHTEQDFRAVRARCEREPHLLKEGAAFVFYALMDQVVDRYFPTLEALGA ELEALEDRIFEKTGTAAARALIEDLYRLKRRLVMLQQHTAPLVEPLAKLVGGRVPQVCAGMDHYFRDVYDHLLRIVRTIE GRREMLVTAIQVNLGMISLAENEVTKRLGSFAALFAIPTMIAGIYGMNFNNIPELHWRFGFYVCLGVMAAADLFLWRRFR KAGWL >Mature_325_residues MLINCAAYQDGRKLADIDIDDISDYVAKPECFVWVALKDPEPDEIERMGEEFGLHELALEDARKGHQRPKIEEYGDALFA VLHTVEIDGQGELQVGELNVFVGPNYVLSIRSHTEQDFRAVRARCEREPHLLKEGAAFVFYALMDQVVDRYFPTLEALGA ELEALEDRIFEKTGTAAARALIEDLYRLKRRLVMLQQHTAPLVEPLAKLVGGRVPQVCAGMDHYFRDVYDHLLRIVRTIE GRREMLVTAIQVNLGMISLAENEVTKRLGSFAALFAIPTMIAGIYGMNFNNIPELHWRFGFYVCLGVMAAADLFLWRRFR KAGWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=305, Percent_Identity=23.9344262295082, Blast_Score=69, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6321058, Length=340, Percent_Identity=21.1764705882353, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324442, Length=139, Percent_Identity=28.0575539568345, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 36989; Mature: 36989
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLINCAAYQDGRKLADIDIDDISDYVAKPECFVWVALKDPEPDEIERMGEEFGLHELALE CEEEECCCCCCCEEECCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCHHHHHHH DARKGHQRPKIEEYGDALFAVLHTVEIDGQGELQVGELNVFVGPNYVLSIRSHTEQDFRA HHHHCCCCCCHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCEEEEEHHCCHHHHHH VRARCEREPHLLKEGAAFVFYALMDQVVDRYFPTLEALGAELEALEDRIFEKTGTAAARA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIEDLYRLKRRLVMLQQHTAPLVEPLAKLVGGRVPQVCAGMDHYFRDVYDHLLRIVRTIE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GRREMLVTAIQVNLGMISLAENEVTKRLGSFAALFAIPTMIAGIYGMNFNNIPELHWRFG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FYVCLGVMAAADLFLWRRFRKAGWL HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLINCAAYQDGRKLADIDIDDISDYVAKPECFVWVALKDPEPDEIERMGEEFGLHELALE CEEEECCCCCCCEEECCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCHHHHHHH DARKGHQRPKIEEYGDALFAVLHTVEIDGQGELQVGELNVFVGPNYVLSIRSHTEQDFRA HHHHCCCCCCHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCEEEEEHHCCHHHHHH VRARCEREPHLLKEGAAFVFYALMDQVVDRYFPTLEALGAELEALEDRIFEKTGTAAARA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIEDLYRLKRRLVMLQQHTAPLVEPLAKLVGGRVPQVCAGMDHYFRDVYDHLLRIVRTIE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GRREMLVTAIQVNLGMISLAENEVTKRLGSFAALFAIPTMIAGIYGMNFNNIPELHWRFG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FYVCLGVMAAADLFLWRRFRKAGWL HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]