| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is nosR [H]
Identifier: 237812445
GI number: 237812445
Start: 2162228
End: 2164360
Strand: Direct
Name: nosR [H]
Synonym: GBP346_A2193
Alternate gene names: 237812445
Gene position: 2162228-2164360 (Clockwise)
Preceding gene: 237812444
Following gene: 237812446
Centisome position: 52.76
GC content: 68.03
Gene sequence:
>2133_bases ATGAAAGCACTGTTCCGGATCCTGCTCATCGCGTTCTTCGTCGTCGCGGCCCGCCCGAGCGCCGCGTCGATCTACGAGCA GGAACTGCCGCCCGAACTCTTCAGCCAGCCCGATCTGTGCAAATGGACCGATTGCGCGTCCGTGCTGCCGGGCGCGAACG CGTTCTCCGCGCGCAAGGGCAGCCCGCCTTACGTCGAGGCGTACGCGGACGACGGCCACGCGCGCGCGCTCAAGGGCTAC GTGTTCCTGTCGACCGACATCGCCGACATTCAGGGCTATTCGGGCAAGCCGATCGTCACGCTGATCGGGATGGACACGAA AGGCACGATCACCGGCGTGCGCGTGCTCAAGCACAGCGAGCCGATCCTGCTCGTCGGGATTCCGGAGAGCAAGCTGCTCG CGTTCCTGCGCCAGTACGTCGGCAAGTTCGCCGGCGCGCGCTTCGAGATCGGCAACGGCGACGCGGGCGCCGCGAGCCTC GACGCGATCTCCGGCGCGACCGTCACCGTGATCGCCGAAAACCAGTTGATCTCGCGCTGCGCGGTGGCGATCGCGAGCCA GGTCGGCATCGTGAAGGAGACCGTGCTGCCGCAGGCGAAGCTGCTGCCGTCCGACGCGCGCGAGACGTGGCAGGCGCTCG TCGAGCGCGGCGCGATCGCGCACCTCGCGATCCGGCCGGACGATGTCGGCGCGCCGGACACGGGCGCGCCCTACCTCGAT CTGTACTACGGCTACCTGAACGCGCCCGCGATCGGCAAGAGCATTCTCGGCGAGCACGAGTACGCGCAACTGATGAGCCG CCTGAAACCGGGCGAGCACGCGCTCTTCGTCGTCGCGAACGGCACCGAATCGTTCAAGGGCTCGGGCTTCGTGCGCGGCG GCATCTACGATCGCATCCAGGTCCGGCAAGGCATCCATGCGTTCACGTTCAAGGATTCCGACTATCTGAACCTGTACGCG CTGCGGGCGGCGGGCGCGCCGTCGTTCAACGAGACGGGCATCTTCATCGTGCGCAGCACGCGGTTCAGCGCCGCGTACCC GTGGAAGTTCGTGTTCCTCGGCCACCGGTCCGACCAGGAAACGGGCGCGAAGACGTTCTCCGCGTTCGCGTCGCCGTACT GGCTGCCCGGCGAATTTCTCGCGGGCGGGCGCCCACGCGTCGACGAGGACGCGCCCGTGTGGCGCAAGGCGTGGGCCGGC AAGCGGCTCGAGATCGGCCTGTTCGTCGGCTGGATCGCGGCCGTCATGCTGTTCTTCGCGACGCGCGAGCGCTGGGTGCG CCGCGCGAAGCGCGCCGACAAGCGCTGGGTGTCGTGGCCGAAGACGGCGAGCTGGCTGATCGCGATCGGCTTCGCCGGCT GGCACGAGCTCGCGCAGCCGTCGATCACGCAGGTGCTCACGCTCGTGCATGCGCTCGCGAGCGGCTGGAACTGGGGGCTG TTCCTGTCCGATCCGTTCATCTTCGTGTTCTGGATCGCGATCGCCGTCACCGTGCTCGTCTGGGGCCGCGGCCTCTTCTG CGGCTGGCTCTGCCCATTCGGCTCGCTGTCCGAGCTGCTGTACAAGATCGCGCGCGCCACCGGCCTGAAGTCGCTGCAGC GCAAGCTGCCGGCGCACTGGCACAACCGGCTGCGCAAGCTGAAATACGCGGTGTTCGCGGTGCTGCTCGTCGTGTCGTTC TTCTCGATGCCGTGGGCCGAGAAGCTCGCCGAGATCGAGCCGTTCAAGACCACCTTCCTCGTCGGCGTGCTGAATCGCGC CTGGCCGTTCGTGCTGTTCTGGACCGCCGTCGTCGGCGCCTCGATCTTCGTCGAGCGGCCGTTCTGCAAGTACCTGTGCC CGCTCGGCGCGAGCCTCGCGCTGCCCGGGCGCCTGCGGGTCATCAAGCTCAAGCGCAAGCCCGAATGCACGAGCTGCCAT GCGTGCGCGGTCGGCTGCGGCTCGCAGGCGATCGACCCGGCCGGCCGGATCGATCCGATGGAGTGCCTGCTCTGCCTCGA CTGCATGGTCATGTACTACGACGCGCACAGCTGCCCGCCGTTGTCCAAGGAGCGCAAGCGCCGCGAAAAGGCCGGCTTGC CGCTCACGCCCGTCGGCAAGGACGGACGGTACATCCCGATCGAGCGGGTTTGA
Upstream 100 bases:
>100_bases GTCGAAGCCGCCGTCGACTTCATGGTCGCCAAGGCGCACTGACCGCGTTCGCGCGGGCGCCGCGCGCGGCCGCCCGCGCG ACTTCTTCCAAGTGACCCCC
Downstream 100 bases:
>100_bases CGCGCGCGTCGGCGCGCATGAGCGCCGCGCGGCCGGGGACACGCCTGTCGCGCGGCGGCTGGGCGTCTGATGTCCGGCGT TTGGCGTTTGGCGTCCGGCG
Product: regulatory protein NosR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 710; Mature: 710
Protein sequence:
>710_residues MKALFRILLIAFFVVAARPSAASIYEQELPPELFSQPDLCKWTDCASVLPGANAFSARKGSPPYVEAYADDGHARALKGY VFLSTDIADIQGYSGKPIVTLIGMDTKGTITGVRVLKHSEPILLVGIPESKLLAFLRQYVGKFAGARFEIGNGDAGAASL DAISGATVTVIAENQLISRCAVAIASQVGIVKETVLPQAKLLPSDARETWQALVERGAIAHLAIRPDDVGAPDTGAPYLD LYYGYLNAPAIGKSILGEHEYAQLMSRLKPGEHALFVVANGTESFKGSGFVRGGIYDRIQVRQGIHAFTFKDSDYLNLYA LRAAGAPSFNETGIFIVRSTRFSAAYPWKFVFLGHRSDQETGAKTFSAFASPYWLPGEFLAGGRPRVDEDAPVWRKAWAG KRLEIGLFVGWIAAVMLFFATRERWVRRAKRADKRWVSWPKTASWLIAIGFAGWHELAQPSITQVLTLVHALASGWNWGL FLSDPFIFVFWIAIAVTVLVWGRGLFCGWLCPFGSLSELLYKIARATGLKSLQRKLPAHWHNRLRKLKYAVFAVLLVVSF FSMPWAEKLAEIEPFKTTFLVGVLNRAWPFVLFWTAVVGASIFVERPFCKYLCPLGASLALPGRLRVIKLKRKPECTSCH ACAVGCGSQAIDPAGRIDPMECLLCLDCMVMYYDAHSCPPLSKERKRREKAGLPLTPVGKDGRYIPIERV
Sequences:
>Translated_710_residues MKALFRILLIAFFVVAARPSAASIYEQELPPELFSQPDLCKWTDCASVLPGANAFSARKGSPPYVEAYADDGHARALKGY VFLSTDIADIQGYSGKPIVTLIGMDTKGTITGVRVLKHSEPILLVGIPESKLLAFLRQYVGKFAGARFEIGNGDAGAASL DAISGATVTVIAENQLISRCAVAIASQVGIVKETVLPQAKLLPSDARETWQALVERGAIAHLAIRPDDVGAPDTGAPYLD LYYGYLNAPAIGKSILGEHEYAQLMSRLKPGEHALFVVANGTESFKGSGFVRGGIYDRIQVRQGIHAFTFKDSDYLNLYA LRAAGAPSFNETGIFIVRSTRFSAAYPWKFVFLGHRSDQETGAKTFSAFASPYWLPGEFLAGGRPRVDEDAPVWRKAWAG KRLEIGLFVGWIAAVMLFFATRERWVRRAKRADKRWVSWPKTASWLIAIGFAGWHELAQPSITQVLTLVHALASGWNWGL FLSDPFIFVFWIAIAVTVLVWGRGLFCGWLCPFGSLSELLYKIARATGLKSLQRKLPAHWHNRLRKLKYAVFAVLLVVSF FSMPWAEKLAEIEPFKTTFLVGVLNRAWPFVLFWTAVVGASIFVERPFCKYLCPLGASLALPGRLRVIKLKRKPECTSCH ACAVGCGSQAIDPAGRIDPMECLLCLDCMVMYYDAHSCPPLSKERKRREKAGLPLTPVGKDGRYIPIERV >Mature_710_residues MKALFRILLIAFFVVAARPSAASIYEQELPPELFSQPDLCKWTDCASVLPGANAFSARKGSPPYVEAYADDGHARALKGY VFLSTDIADIQGYSGKPIVTLIGMDTKGTITGVRVLKHSEPILLVGIPESKLLAFLRQYVGKFAGARFEIGNGDAGAASL DAISGATVTVIAENQLISRCAVAIASQVGIVKETVLPQAKLLPSDARETWQALVERGAIAHLAIRPDDVGAPDTGAPYLD LYYGYLNAPAIGKSILGEHEYAQLMSRLKPGEHALFVVANGTESFKGSGFVRGGIYDRIQVRQGIHAFTFKDSDYLNLYA LRAAGAPSFNETGIFIVRSTRFSAAYPWKFVFLGHRSDQETGAKTFSAFASPYWLPGEFLAGGRPRVDEDAPVWRKAWAG KRLEIGLFVGWIAAVMLFFATRERWVRRAKRADKRWVSWPKTASWLIAIGFAGWHELAQPSITQVLTLVHALASGWNWGL FLSDPFIFVFWIAIAVTVLVWGRGLFCGWLCPFGSLSELLYKIARATGLKSLQRKLPAHWHNRLRKLKYAVFAVLLVVSF FSMPWAEKLAEIEPFKTTFLVGVLNRAWPFVLFWTAVVGASIFVERPFCKYLCPLGASLALPGRLRVIKLKRKPECTSCH ACAVGCGSQAIDPAGRIDPMECLLCLDCMVMYYDAHSCPPLSKERKRREKAGLPLTPVGKDGRYIPIERV
Specific function: Transcriptional activator of the nitrous-oxide reductase gene nosZ [H]
COG id: COG3901
COG function: function code K; Regulator of nitric oxide reductase transcription
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787226, Length=298, Percent_Identity=25.1677852348993, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007329 - InterPro: IPR011399 [H]
Pfam domain/function: PF04205 FMN_bind [H]
EC number: NA
Molecular weight: Translated: 78291; Mature: 78291
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALFRILLIAFFVVAARPSAASIYEQELPPELFSQPDLCKWTDCASVLPGANAFSARKG CHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCC SPPYVEAYADDGHARALKGYVFLSTDIADIQGYSGKPIVTLIGMDTKGTITGVRVLKHSE CCCEEEEECCCCCCEEEEEEEEEECCHHHCCCCCCCCEEEEEECCCCCCCHHEEEEECCC PILLVGIPESKLLAFLRQYVGKFAGARFEIGNGDAGAASLDAISGATVTVIAENQLISRC CEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCEEEEEECHHHHHHH AVAIASQVGIVKETVLPQAKLLPSDARETWQALVERGAIAHLAIRPDDVGAPDTGAPYLD HHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHH LYYGYLNAPAIGKSILGEHEYAQLMSRLKPGEHALFVVANGTESFKGSGFVRGGIYDRIQ HHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCHHHHH VRQGIHAFTFKDSDYLNLYALRAAGAPSFNETGIFIVRSTRFSAAYPWKFVFLGHRSDQE HHCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCH TGAKTFSAFASPYWLPGEFLAGGRPRVDEDAPVWRKAWAGKRLEIGLFVGWIAAVMLFFA HHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHH TRERWVRRAKRADKRWVSWPKTASWLIAIGFAGWHELAQPSITQVLTLVHALASGWNWGL HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCEE FLSDPFIFVFWIAIAVTVLVWGRGLFCGWLCPFGSLSELLYKIARATGLKSLQRKLPAHW EECCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH HNRLRKLKYAVFAVLLVVSFFSMPWAEKLAEIEPFKTTFLVGVLNRAWPFVLFWTAVVGA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC SIFVERPFCKYLCPLGASLALPGRLRVIKLKRKPECTSCHACAVGCGSQAIDPAGRIDPM HHEECCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCHH ECLLCLDCMVMYYDAHSCPPLSKERKRREKAGLPLTPVGKDGRYIPIERV HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCC >Mature Secondary Structure MKALFRILLIAFFVVAARPSAASIYEQELPPELFSQPDLCKWTDCASVLPGANAFSARKG CHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCC SPPYVEAYADDGHARALKGYVFLSTDIADIQGYSGKPIVTLIGMDTKGTITGVRVLKHSE CCCEEEEECCCCCCEEEEEEEEEECCHHHCCCCCCCCEEEEEECCCCCCCHHEEEEECCC PILLVGIPESKLLAFLRQYVGKFAGARFEIGNGDAGAASLDAISGATVTVIAENQLISRC CEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCEEEEEECHHHHHHH AVAIASQVGIVKETVLPQAKLLPSDARETWQALVERGAIAHLAIRPDDVGAPDTGAPYLD HHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHH LYYGYLNAPAIGKSILGEHEYAQLMSRLKPGEHALFVVANGTESFKGSGFVRGGIYDRIQ HHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCHHHHH VRQGIHAFTFKDSDYLNLYALRAAGAPSFNETGIFIVRSTRFSAAYPWKFVFLGHRSDQE HHCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCH TGAKTFSAFASPYWLPGEFLAGGRPRVDEDAPVWRKAWAGKRLEIGLFVGWIAAVMLFFA HHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHH TRERWVRRAKRADKRWVSWPKTASWLIAIGFAGWHELAQPSITQVLTLVHALASGWNWGL HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCEE FLSDPFIFVFWIAIAVTVLVWGRGLFCGWLCPFGSLSELLYKIARATGLKSLQRKLPAHW EECCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH HNRLRKLKYAVFAVLLVVSFFSMPWAEKLAEIEPFKTTFLVGVLNRAWPFVLFWTAVVGA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC SIFVERPFCKYLCPLGASLALPGRLRVIKLKRKPECTSCHACAVGCGSQAIDPAGRIDPM HHEECCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCHH ECLLCLDCMVMYYDAHSCPPLSKERKRREKAGLPLTPVGKDGRYIPIERV HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]