| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812431
Identifier: 237812431
GI number: 237812431
Start: 2149432
End: 2149917
Strand: Reverse
Name: 237812431
Synonym: GBP346_A2179
Alternate gene names: NA
Gene position: 2149917-2149432 (Counterclockwise)
Preceding gene: 237812432
Following gene: 237812430
Centisome position: 52.46
GC content: 69.14
Gene sequence:
>486_bases ATGAAAACGAACGGCAAGCGGCCGATGCCCCTGTTTCTCCAAGGCGTGGTGTCCGAAGCGGGCTACGCGCGCGGGTTGCT GCGCGAGGCGCAAGCGCACGTCGTTCGCGGCCGCCGGCGGGGCATGTCCGCGACGGGCGCGCAATACCGCGACGCGATAC ACGCGGCGGTCGTCGCGAGCGGCGGCTTCGACGGCTGCACGGGCGAGCCGCTCGATTGGCATCTCGTTTCGACTGACGCC AATGACGATTCGCGACAGGGGTGGCACAGCTACAAGGCGGGCTTCGCGCTGCTGCCGAGCGTCGATCATGTCGACGCGTC GGCCGCCCCGGCCGCGTTCAAGATCCGCGCGTGGCGCACGAACGATGCGAAGAGCGGCCTGTCGGCGCGGAGTTTCATCG CGCTGTGCGAGCGTGTTCTCATGCATGCGGGCTATCGCGTGCACGCGCCGAATGACGCGGAGGGGCTCGACGCATCCCGC GCGTAG
Upstream 100 bases:
>100_bases GTTCGCCCGCGCGCACATAGGTCGAGGCGCGCCGCGGGCGTTCGGTCGGTCCGCGTTCGCTCGGCAGGCACGGATCGAGG GCAATGAAAAATCGAAGGCA
Downstream 100 bases:
>100_bases CCGTTCGTTTCATTCGATGTCGCGAGCGCCGCGGCGCTCGAGCGCGAACGCGCGGTGAACCGGTCCCGATGGCACAATGC ATGGCAGCATGCCGGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKTNGKRPMPLFLQGVVSEAGYARGLLREAQAHVVRGRRRGMSATGAQYRDAIHAAVVASGGFDGCTGEPLDWHLVSTDA NDDSRQGWHSYKAGFALLPSVDHVDASAAPAAFKIRAWRTNDAKSGLSARSFIALCERVLMHAGYRVHAPNDAEGLDASR A
Sequences:
>Translated_161_residues MKTNGKRPMPLFLQGVVSEAGYARGLLREAQAHVVRGRRRGMSATGAQYRDAIHAAVVASGGFDGCTGEPLDWHLVSTDA NDDSRQGWHSYKAGFALLPSVDHVDASAAPAAFKIRAWRTNDAKSGLSARSFIALCERVLMHAGYRVHAPNDAEGLDASR A >Mature_161_residues MKTNGKRPMPLFLQGVVSEAGYARGLLREAQAHVVRGRRRGMSATGAQYRDAIHAAVVASGGFDGCTGEPLDWHLVSTDA NDDSRQGWHSYKAGFALLPSVDHVDASAAPAAFKIRAWRTNDAKSGLSARSFIALCERVLMHAGYRVHAPNDAEGLDASR A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17274; Mature: 17274
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNGKRPMPLFLQGVVSEAGYARGLLREAQAHVVRGRRRGMSATGAQYRDAIHAAVVAS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC GGFDGCTGEPLDWHLVSTDANDDSRQGWHSYKAGFALLPSVDHVDASAAPAAFKIRAWRT CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEECC NDAKSGLSARSFIALCERVLMHAGYRVHAPNDAEGLDASRA CCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MKTNGKRPMPLFLQGVVSEAGYARGLLREAQAHVVRGRRRGMSATGAQYRDAIHAAVVAS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC GGFDGCTGEPLDWHLVSTDANDDSRQGWHSYKAGFALLPSVDHVDASAAPAAFKIRAWRT CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEECC NDAKSGLSARSFIALCERVLMHAGYRVHAPNDAEGLDASRA CCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA