| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is cbaA [H]
Identifier: 237812428
GI number: 237812428
Start: 2145104
End: 2146102
Strand: Direct
Name: cbaA [H]
Synonym: GBP346_A2176
Alternate gene names: 237812428
Gene position: 2145104-2146102 (Clockwise)
Preceding gene: 237812427
Following gene: 237812429
Centisome position: 52.34
GC content: 73.77
Gene sequence:
>999_bases ATGGATACCATCGTTCCGTTTCTTTCCGATTCCACCGCACGCTGGCTGCCGCTCGCGCTGTCCGAACAGGTGAGCGGCAA GGCCCCGCTCGCCGTGATGTGCATGGGGCAGGCGATCGTGCTGTTTCGCGACGCGGCCGGCGCCGTGCGCGCGATGGAAG ACCGCTGCGCGCATCGCCGCGCGCCGCTGTCGCTCGGGCGCGTCACGCCCGAGGGCCGGCTGCAGTGCGGCTATCACGGC TGGACCTATGACGGCGCGAGCGGCACGTGCGTCGCGATCCCGAATCTGTCGCCTCACGAGCGGGTGCCGGCGCATTACGC GGCGCGCGCATACGAGACGCTCGAGCGCGACGGCTACGTCTGGGCGCGCGCGGCGCGCGGCGTCGACACCCGCGAGCCGG CCGCGGCGGCCGCGCGCGCGACGCGCTGCGCGCAGCGATTCGCGGGCTGCGCGACGGTGAGCCTCGCATACGACGACTAT GTCGCCGCGCTCGCCGACGGCCCGCATTTGCTGATGCGCATCGCGGGCCTGCGCATCACCGATTACGTGATCGCCGATCC CGAGCCGCGCGGCGGGCGCCTCGCCATGGAGCGCGGCGTCACGTGGGCGGCGCGCCGCCACGATCATCGGTTCGGCGCGC ACTACCCGTGGACGCTTCGGCTCACGGCGCCGCAAGATGGCGCGCCCGCCTCGGTCGAAATCGACACGCGCGACGGCGCG CCGATGCTGTGGGCGTCCGTCGCGATCGCGCCCGCGGCCCGCGGCGCGACGAACCTGCTGTGGCGCGGCGGCGTCGCGGC CGATACCGGCGGCGCCGGCCCCGCGCTGTTTCGCCTGTGGGCGCGGCTGCGCCGCTCGCCGTTCGCGATGCTCGAGCACG TCGACGGGCACGCACTCGCGAAGCTCGACGCGTCGTGCTCGCGCGCATGGCCGCGCGCGCAACATGCGCGCGTGATCCCG GTCGAATCCGACCGGTTACCGTGTGAGGGGAGCAGATGA
Upstream 100 bases:
>100_bases CGCGCCGGCGGGATTTCGCGCGACGCAGGCTCAGGCGGCAGGCGGCGATGCCCGTCTGCCAGGATTGCCGGAGGCATCGC GCCCGTCGCGATGAATACCC
Downstream 100 bases:
>100_bases TGGCGACCGTTGACGAAGACGACATCGGCACGGCGAGCGGCCGCGACGAAGGCGACTGGGTGCCCAACCGGTTTTGCTTG CGCAACGCCTGGTTTCCCCT
Product: Rieske (2Fe-2S) domain protein
Products: NAD; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol [C]
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MDTIVPFLSDSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVTPEGRLQCGYHG WTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWARAARGVDTREPAAAAARATRCAQRFAGCATVSLAYDDY VAALADGPHLLMRIAGLRITDYVIADPEPRGGRLAMERGVTWAARRHDHRFGAHYPWTLRLTAPQDGAPASVEIDTRDGA PMLWASVAIAPAARGATNLLWRGGVAADTGGAGPALFRLWARLRRSPFAMLEHVDGHALAKLDASCSRAWPRAQHARVIP VESDRLPCEGSR
Sequences:
>Translated_332_residues MDTIVPFLSDSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVTPEGRLQCGYHG WTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWARAARGVDTREPAAAAARATRCAQRFAGCATVSLAYDDY VAALADGPHLLMRIAGLRITDYVIADPEPRGGRLAMERGVTWAARRHDHRFGAHYPWTLRLTAPQDGAPASVEIDTRDGA PMLWASVAIAPAARGATNLLWRGGVAADTGGAGPALFRLWARLRRSPFAMLEHVDGHALAKLDASCSRAWPRAQHARVIP VESDRLPCEGSR >Mature_332_residues MDTIVPFLSDSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVTPEGRLQCGYHG WTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWARAARGVDTREPAAAAARATRCAQRFAGCATVSLAYDDY VAALADGPHLLMRIAGLRITDYVIADPEPRGGRLAMERGVTWAARRHDHRFGAHYPWTLRLTAPQDGAPASVEIDTRDGA PMLWASVAIAPAARGATNLLWRGGVAADTGGAGPALFRLWARLRRSPFAMLEHVDGHALAKLDASCSRAWPRAQHARVIP VESDRLPCEGSR
Specific function: Part Of The Multicomponent 3-Phenylpropionate Dioxygenase. Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). [C]
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 35874; Mature: 35874
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIVPFLSDSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRR CCCCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHC APLSLGRVTPEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYV CCCHHCCCCCCCCEEECCCCEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEE WARAARGVDTREPAAAAARATRCAQRFAGCATVSLAYDDYVAALADGPHLLMRIAGLRIT EEEHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCHHHHHHHHCCEEE DYVIADPEPRGGRLAMERGVTWAARRHDHRFGAHYPWTLRLTAPQDGAPASVEIDTRDGA EEEEECCCCCCCEEEHHCCCEEEHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCC PMLWASVAIAPAARGATNLLWRGGVAADTGGAGPALFRLWARLRRSPFAMLEHVDGHALA CCHHHHHHHCCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCEE KLDASCSRAWPRAQHARVIPVESDRLPCEGSR HHCCHHHHCCCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MDTIVPFLSDSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRR CCCCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHC APLSLGRVTPEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYV CCCHHCCCCCCCCEEECCCCEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEE WARAARGVDTREPAAAAARATRCAQRFAGCATVSLAYDDYVAALADGPHLLMRIAGLRIT EEEHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCHHHHHHHHCCEEE DYVIADPEPRGGRLAMERGVTWAARRHDHRFGAHYPWTLRLTAPQDGAPASVEIDTRDGA EEEEECCCCCCCEEEHHCCCEEEHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCC PMLWASVAIAPAARGATNLLWRGGVAADTGGAGPALFRLWARLRRSPFAMLEHVDGHALA CCHHHHHHHCCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCEE KLDASCSRAWPRAQHARVIPVESDRLPCEGSR HHCCHHHHCCCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: 2Fe-2S. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; Proton; O2; 3-phenylpropionate [C]
Specific reaction: 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD 3-phenylpropionate + NADH + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704279 [H]