| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812424
Identifier: 237812424
GI number: 237812424
Start: 2141399
End: 2142097
Strand: Direct
Name: 237812424
Synonym: GBP346_A2173
Alternate gene names: NA
Gene position: 2141399-2142097 (Clockwise)
Preceding gene: 237812423
Following gene: 237812426
Centisome position: 52.25
GC content: 56.65
Gene sequence:
>699_bases ATGAGGGAAATTCTCGAAACAATTCATAAAAAAAAGGCTGCACTTCTCGATCACCCGGTCTTTCCGCAGCTCGAATCGGT CACTCTTCCCGAAATCAAGGAAATGATGCGCGTGTGGTCGCCGCTGCTGATTCATCTGGCGATGACGTTCCGCGACATCA ATCGCATGTATTACCACTACGAGAAACCGGAAAATGAATTGGAGATCGCGATCAACGATCACGTCGACGTCGACACCGAG CATTGGCACATGATGGTGTCGGACATCAAGACGCTCGGCGTGAACAATCGCGCGTTCGATTGCGAAAGCGCGATCAACGT GATCTGGGCCGATCTCGGCGGCCCGGTGCGCAAGTACATGTACTCGCTCGTGTCGCGCGCACGCCAGTGCGGAAGCTGCC CGCTGCTGAAAATGGCTTCGATGGAGGCCGGCGAGGCCACCTCGAAAGTCTTTTTCACGACGTCGCGCCGGCTCGCGGCG GCCTATGAGGCGGATACGGGCAACACGCTTCGCTATCTGGGCGCCGAGCACATCGACAGCGAACTCGATCATTCGATCAA CGAATCGGTCTTCTTCGGCGAGCCGCTGTCCGCCGACAAGCGGGCTCAAGCGCAATCGATCGTCGACGATCATTTCCGCA GCTTCATTGCCTTCCTCGACTACAAATACGAGGTCAACAAACTGGCGCTCGCCCACTGA
Upstream 100 bases:
>100_bases CCGGATATGCACCTAGACTCGGTCTGAGACAGCGCAATCCGCGCGACGCCCAAGGCCTCGCCCCCAACAATGCAACTCGT TCACCACAGGAGTTCGCGTC
Downstream 100 bases:
>100_bases CGAAATCCCGGGCGTTGCCCGGGCATGATCCGCGCGGCCGGCTCCGGCCGAGTCATCAAGCAGCCCGAATCGATTCGCCG GTTCGGAGAACGTACGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MREILETIHKKKAALLDHPVFPQLESVTLPEIKEMMRVWSPLLIHLAMTFRDINRMYYHYEKPENELEIAINDHVDVDTE HWHMMVSDIKTLGVNNRAFDCESAINVIWADLGGPVRKYMYSLVSRARQCGSCPLLKMASMEAGEATSKVFFTTSRRLAA AYEADTGNTLRYLGAEHIDSELDHSINESVFFGEPLSADKRAQAQSIVDDHFRSFIAFLDYKYEVNKLALAH
Sequences:
>Translated_232_residues MREILETIHKKKAALLDHPVFPQLESVTLPEIKEMMRVWSPLLIHLAMTFRDINRMYYHYEKPENELEIAINDHVDVDTE HWHMMVSDIKTLGVNNRAFDCESAINVIWADLGGPVRKYMYSLVSRARQCGSCPLLKMASMEAGEATSKVFFTTSRRLAA AYEADTGNTLRYLGAEHIDSELDHSINESVFFGEPLSADKRAQAQSIVDDHFRSFIAFLDYKYEVNKLALAH >Mature_232_residues MREILETIHKKKAALLDHPVFPQLESVTLPEIKEMMRVWSPLLIHLAMTFRDINRMYYHYEKPENELEIAINDHVDVDTE HWHMMVSDIKTLGVNNRAFDCESAINVIWADLGGPVRKYMYSLVSRARQCGSCPLLKMASMEAGEATSKVFFTTSRRLAA AYEADTGNTLRYLGAEHIDSELDHSINESVFFGEPLSADKRAQAQSIVDDHFRSFIAFLDYKYEVNKLALAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26598; Mature: 26598
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREILETIHKKKAALLDHPVFPQLESVTLPEIKEMMRVWSPLLIHLAMTFRDINRMYYHY CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EKPENELEIAINDHVDVDTEHWHMMVSDIKTLGVNNRAFDCESAINVIWADLGGPVRKYM CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHH YSLVSRARQCGSCPLLKMASMEAGEATSKVFFTTSRRLAAAYEADTGNTLRYLGAEHIDS HHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEECCCHHHHHEECCCCCHHHHHCHHHHHH ELDHSINESVFFGEPLSADKRAQAQSIVDDHFRSFIAFLDYKYEVNKLALAH HHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCC >Mature Secondary Structure MREILETIHKKKAALLDHPVFPQLESVTLPEIKEMMRVWSPLLIHLAMTFRDINRMYYHY CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EKPENELEIAINDHVDVDTEHWHMMVSDIKTLGVNNRAFDCESAINVIWADLGGPVRKYM CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHH YSLVSRARQCGSCPLLKMASMEAGEATSKVFFTTSRRLAAAYEADTGNTLRYLGAEHIDS HHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEECCCHHHHHEECCCCCHHHHHCHHHHHH ELDHSINESVFFGEPLSADKRAQAQSIVDDHFRSFIAFLDYKYEVNKLALAH HHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA