| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812419
Identifier: 237812419
GI number: 237812419
Start: 2138002
End: 2138772
Strand: Reverse
Name: 237812419
Synonym: GBP346_A2167
Alternate gene names: NA
Gene position: 2138772-2138002 (Counterclockwise)
Preceding gene: 237812420
Following gene: 237812418
Centisome position: 52.18
GC content: 57.46
Gene sequence:
>771_bases ATGAAGTCAAGCAAGATATCCAAAACCCTGATTTGCTCGCTTCTCGCATTTTCCGCTACCGCTTTTTCGATTCATCCTGT TCTCGCGGCCTCCCCACAGGGCGGCAAGATCGCGACAACGATCCAGGCGGCTCAAGGCCAAACGGATATCGCCGCTTTAT TCAAGAAAACGAATTTCCAAATGGATTCGGCGGCCGAATACGGAAAGGTGATGCAGGCCATCGCCGCAAACGAAAGCGCC GCTGTCACGTATGTGCAAGACAGCCGCCTGTCGGCCACCGAGGTTCAAACGACGCATCCGATCTGGAGCGGCGTACAGAA TGGCGACAGGCTCGGCGTCAGCTGGAGCGGCGGTGATTTTCAGCATCAACGGATCTTCGTCTACGAAGGCAACGGCAATG CCGGGAAGTGGAAAAAAGCCGAGGCGGCGGACATTCCGCTCAAGCAGGGCGGAGCGCCTTCCATCCTGAATCAGACGCCG CTGATGCCGCTGATGCCGCAGCAGCAGGTGCGCGAAACGTCCGCGTCGGCCAAGAGTGTCGCGGATGTCGTTTCCGTGTC GCTATATCGACGAGTGACTGGAAATATCGATATCTATACGGTAAAAGTGGGCAGCAGGATTCAAGGCATTTACGGTGTCG GCATGACTGCTCCCGGCTGGATTCAAGCCGACGGCGTCGGAACGGATATCGTCGTATTTCAGGTCCGCGCCTCCGGGACA CCCGGTTTGTTTTATAGCGGCGTGGCGAGCGCCACCGTCATCCGCGAGTGA
Upstream 100 bases:
>100_bases CGCAGCTGACGATTTCCCTACGGCGCATTAGCATCGATCTGCACCACCCACACGAGAAAAACCTGGCTGATCATCACACT CCATCCAATCTGGGGAATTT
Downstream 100 bases:
>100_bases ACGCTTCACCGGCCATCGAGCCGAGCGTCGCGAAGCTTGACGGCAACGGAGCGCGTGCCTTCGGACGCAGCGCCGAGGGC ATGCGGTTCGCCGTCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKSSKISKTLICSLLAFSATAFSIHPVLAASPQGGKIATTIQAAQGQTDIAALFKKTNFQMDSAAEYGKVMQAIAANESA AVTYVQDSRLSATEVQTTHPIWSGVQNGDRLGVSWSGGDFQHQRIFVYEGNGNAGKWKKAEAADIPLKQGGAPSILNQTP LMPLMPQQQVRETSASAKSVADVVSVSLYRRVTGNIDIYTVKVGSRIQGIYGVGMTAPGWIQADGVGTDIVVFQVRASGT PGLFYSGVASATVIRE
Sequences:
>Translated_256_residues MKSSKISKTLICSLLAFSATAFSIHPVLAASPQGGKIATTIQAAQGQTDIAALFKKTNFQMDSAAEYGKVMQAIAANESA AVTYVQDSRLSATEVQTTHPIWSGVQNGDRLGVSWSGGDFQHQRIFVYEGNGNAGKWKKAEAADIPLKQGGAPSILNQTP LMPLMPQQQVRETSASAKSVADVVSVSLYRRVTGNIDIYTVKVGSRIQGIYGVGMTAPGWIQADGVGTDIVVFQVRASGT PGLFYSGVASATVIRE >Mature_256_residues MKSSKISKTLICSLLAFSATAFSIHPVLAASPQGGKIATTIQAAQGQTDIAALFKKTNFQMDSAAEYGKVMQAIAANESA AVTYVQDSRLSATEVQTTHPIWSGVQNGDRLGVSWSGGDFQHQRIFVYEGNGNAGKWKKAEAADIPLKQGGAPSILNQTP LMPLMPQQQVRETSASAKSVADVVSVSLYRRVTGNIDIYTVKVGSRIQGIYGVGMTAPGWIQADGVGTDIVVFQVRASGT PGLFYSGVASATVIRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27043; Mature: 27043
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSKISKTLICSLLAFSATAFSIHPVLAASPQGGKIATTIQAAQGQTDIAALFKKTNFQ CCCCHHHHHHHHHHHHHHHHEEEECEEEEECCCCCEEEEEEEECCCCHHHHHHHHHCCCC MDSAAEYGKVMQAIAANESAAVTYVQDSRLSATEVQTTHPIWSGVQNGDRLGVSWSGGDF CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHEEECCHHHHCCCCCCEEEEEECCCCC QHQRIFVYEGNGNAGKWKKAEAADIPLKQGGAPSILNQTPLMPLMPQQQVRETSASAKSV CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ADVVSVSLYRRVTGNIDIYTVKVGSRIQGIYGVGMTAPGWIQADGVGTDIVVFQVRASGT HHHHHHHHHHHHCCCEEEEEEEECCEECEEEECCCCCCCEEEECCCCCEEEEEEEECCCC PGLFYSGVASATVIRE CCEEECCCCCEEEECC >Mature Secondary Structure MKSSKISKTLICSLLAFSATAFSIHPVLAASPQGGKIATTIQAAQGQTDIAALFKKTNFQ CCCCHHHHHHHHHHHHHHHHEEEECEEEEECCCCCEEEEEEEECCCCHHHHHHHHHCCCC MDSAAEYGKVMQAIAANESAAVTYVQDSRLSATEVQTTHPIWSGVQNGDRLGVSWSGGDF CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHEEECCHHHHCCCCCCEEEEEECCCCC QHQRIFVYEGNGNAGKWKKAEAADIPLKQGGAPSILNQTPLMPLMPQQQVRETSASAKSV CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ADVVSVSLYRRVTGNIDIYTVKVGSRIQGIYGVGMTAPGWIQADGVGTDIVVFQVRASGT HHHHHHHHHHHHCCCEEEEEEEECCEECEEEECCCCCCCEEEECCCCCEEEEEEEECCCC PGLFYSGVASATVIRE CCEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA