Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237812419

Identifier: 237812419

GI number: 237812419

Start: 2138002

End: 2138772

Strand: Reverse

Name: 237812419

Synonym: GBP346_A2167

Alternate gene names: NA

Gene position: 2138772-2138002 (Counterclockwise)

Preceding gene: 237812420

Following gene: 237812418

Centisome position: 52.18

GC content: 57.46

Gene sequence:

>771_bases
ATGAAGTCAAGCAAGATATCCAAAACCCTGATTTGCTCGCTTCTCGCATTTTCCGCTACCGCTTTTTCGATTCATCCTGT
TCTCGCGGCCTCCCCACAGGGCGGCAAGATCGCGACAACGATCCAGGCGGCTCAAGGCCAAACGGATATCGCCGCTTTAT
TCAAGAAAACGAATTTCCAAATGGATTCGGCGGCCGAATACGGAAAGGTGATGCAGGCCATCGCCGCAAACGAAAGCGCC
GCTGTCACGTATGTGCAAGACAGCCGCCTGTCGGCCACCGAGGTTCAAACGACGCATCCGATCTGGAGCGGCGTACAGAA
TGGCGACAGGCTCGGCGTCAGCTGGAGCGGCGGTGATTTTCAGCATCAACGGATCTTCGTCTACGAAGGCAACGGCAATG
CCGGGAAGTGGAAAAAAGCCGAGGCGGCGGACATTCCGCTCAAGCAGGGCGGAGCGCCTTCCATCCTGAATCAGACGCCG
CTGATGCCGCTGATGCCGCAGCAGCAGGTGCGCGAAACGTCCGCGTCGGCCAAGAGTGTCGCGGATGTCGTTTCCGTGTC
GCTATATCGACGAGTGACTGGAAATATCGATATCTATACGGTAAAAGTGGGCAGCAGGATTCAAGGCATTTACGGTGTCG
GCATGACTGCTCCCGGCTGGATTCAAGCCGACGGCGTCGGAACGGATATCGTCGTATTTCAGGTCCGCGCCTCCGGGACA
CCCGGTTTGTTTTATAGCGGCGTGGCGAGCGCCACCGTCATCCGCGAGTGA

Upstream 100 bases:

>100_bases
CGCAGCTGACGATTTCCCTACGGCGCATTAGCATCGATCTGCACCACCCACACGAGAAAAACCTGGCTGATCATCACACT
CCATCCAATCTGGGGAATTT

Downstream 100 bases:

>100_bases
ACGCTTCACCGGCCATCGAGCCGAGCGTCGCGAAGCTTGACGGCAACGGAGCGCGTGCCTTCGGACGCAGCGCCGAGGGC
ATGCGGTTCGCCGTCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKSSKISKTLICSLLAFSATAFSIHPVLAASPQGGKIATTIQAAQGQTDIAALFKKTNFQMDSAAEYGKVMQAIAANESA
AVTYVQDSRLSATEVQTTHPIWSGVQNGDRLGVSWSGGDFQHQRIFVYEGNGNAGKWKKAEAADIPLKQGGAPSILNQTP
LMPLMPQQQVRETSASAKSVADVVSVSLYRRVTGNIDIYTVKVGSRIQGIYGVGMTAPGWIQADGVGTDIVVFQVRASGT
PGLFYSGVASATVIRE

Sequences:

>Translated_256_residues
MKSSKISKTLICSLLAFSATAFSIHPVLAASPQGGKIATTIQAAQGQTDIAALFKKTNFQMDSAAEYGKVMQAIAANESA
AVTYVQDSRLSATEVQTTHPIWSGVQNGDRLGVSWSGGDFQHQRIFVYEGNGNAGKWKKAEAADIPLKQGGAPSILNQTP
LMPLMPQQQVRETSASAKSVADVVSVSLYRRVTGNIDIYTVKVGSRIQGIYGVGMTAPGWIQADGVGTDIVVFQVRASGT
PGLFYSGVASATVIRE
>Mature_256_residues
MKSSKISKTLICSLLAFSATAFSIHPVLAASPQGGKIATTIQAAQGQTDIAALFKKTNFQMDSAAEYGKVMQAIAANESA
AVTYVQDSRLSATEVQTTHPIWSGVQNGDRLGVSWSGGDFQHQRIFVYEGNGNAGKWKKAEAADIPLKQGGAPSILNQTP
LMPLMPQQQVRETSASAKSVADVVSVSLYRRVTGNIDIYTVKVGSRIQGIYGVGMTAPGWIQADGVGTDIVVFQVRASGT
PGLFYSGVASATVIRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27043; Mature: 27043

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSKISKTLICSLLAFSATAFSIHPVLAASPQGGKIATTIQAAQGQTDIAALFKKTNFQ
CCCCHHHHHHHHHHHHHHHHEEEECEEEEECCCCCEEEEEEEECCCCHHHHHHHHHCCCC
MDSAAEYGKVMQAIAANESAAVTYVQDSRLSATEVQTTHPIWSGVQNGDRLGVSWSGGDF
CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHEEECCHHHHCCCCCCEEEEEECCCCC
QHQRIFVYEGNGNAGKWKKAEAADIPLKQGGAPSILNQTPLMPLMPQQQVRETSASAKSV
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ADVVSVSLYRRVTGNIDIYTVKVGSRIQGIYGVGMTAPGWIQADGVGTDIVVFQVRASGT
HHHHHHHHHHHHCCCEEEEEEEECCEECEEEECCCCCCCEEEECCCCCEEEEEEEECCCC
PGLFYSGVASATVIRE
CCEEECCCCCEEEECC
>Mature Secondary Structure
MKSSKISKTLICSLLAFSATAFSIHPVLAASPQGGKIATTIQAAQGQTDIAALFKKTNFQ
CCCCHHHHHHHHHHHHHHHHEEEECEEEEECCCCCEEEEEEEECCCCHHHHHHHHHCCCC
MDSAAEYGKVMQAIAANESAAVTYVQDSRLSATEVQTTHPIWSGVQNGDRLGVSWSGGDF
CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHEEECCHHHHCCCCCCEEEEEECCCCC
QHQRIFVYEGNGNAGKWKKAEAADIPLKQGGAPSILNQTPLMPLMPQQQVRETSASAKSV
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ADVVSVSLYRRVTGNIDIYTVKVGSRIQGIYGVGMTAPGWIQADGVGTDIVVFQVRASGT
HHHHHHHHHHHHCCCEEEEEEEECCEECEEEECCCCCCCEEEECCCCCEEEEEEEECCCC
PGLFYSGVASATVIRE
CCEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA