| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812398
Identifier: 237812398
GI number: 237812398
Start: 2117060
End: 2117467
Strand: Reverse
Name: 237812398
Synonym: GBP346_A2146
Alternate gene names: NA
Gene position: 2117467-2117060 (Counterclockwise)
Preceding gene: 237812399
Following gene: 237812397
Centisome position: 51.66
GC content: 73.77
Gene sequence:
>408_bases ATGGCGAGCCGGGTTGCGCAGCCGCCGCGCGTGCGCCGACGCGAGGACGGCCGCGAGTCGCGGCCGGTGAGATCCGCGCC GCGCTCGCGCGCGCCGATGTCTGACGCGGGCGTCGCGGATGGCGTTTATGCCGCTCATGCTTTCGCTCGTCGGTCTTGGG CGATCCGGTGGCCCGCCGAGCGCGCATCCGATGCGCTCGCGTGTCCGTGCGCGCATGCGCGGCGGCACGGCGCGTTCGAC GTGGCCCGCGCGCGGCGCGATGCGGCCGACGACGGCATACGCGATCGCGCCCGGCGCGGGGCCGTTCGCCTGCCGATATC GCGCGCCGCGGCCCGACGGGCCGGCTCATTGCGAACCCACGTCCAGACATTGCCTCGCTTGTCTTCGCCCGGAAGTCACA ATTGTTAG
Upstream 100 bases:
>100_bases ACTGAATCTGCGTGAGCCGCCGTTCTGACGCGGCGAGCCTGGCCGCTCGCGTTTCATCCCGAGGTGCGGGATCGGGCACG CGTGCGGTCGGCCCGCCCGC
Downstream 100 bases:
>100_bases AGACGCGGCCTCGTGTCGTTTCTTGCACGCGCTTGCATCGTCGAGCGCGCGCGTCGCGCCGGCTGCGCGGACATTTCTAA GAACTTTGATTCAGTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MASRVAQPPRVRRREDGRESRPVRSAPRSRAPMSDAGVADGVYAAHAFARRSWAIRWPAERASDALACPCAHARRHGAFD VARARRDAADDGIRDRARRGAVRLPISRAAARRAGSLRTHVQTLPRLSSPGSHNC
Sequences:
>Translated_135_residues MASRVAQPPRVRRREDGRESRPVRSAPRSRAPMSDAGVADGVYAAHAFARRSWAIRWPAERASDALACPCAHARRHGAFD VARARRDAADDGIRDRARRGAVRLPISRAAARRAGSLRTHVQTLPRLSSPGSHNC >Mature_134_residues ASRVAQPPRVRRREDGRESRPVRSAPRSRAPMSDAGVADGVYAAHAFARRSWAIRWPAERASDALACPCAHARRHGAFDV ARARRDAADDGIRDRARRGAVRLPISRAAARRAGSLRTHVQTLPRLSSPGSHNC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14792; Mature: 14661
Theoretical pI: Translated: 12.35; Mature: 12.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRVAQPPRVRRREDGRESRPVRSAPRSRAPMSDAGVADGVYAAHAFARRSWAIRWPAE CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCHH RASDALACPCAHARRHGAFDVARARRDAADDGIRDRARRGAVRLPISRAAARRAGSLRTH HCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VQTLPRLSSPGSHNC HHHHHCCCCCCCCCC >Mature Secondary Structure ASRVAQPPRVRRREDGRESRPVRSAPRSRAPMSDAGVADGVYAAHAFARRSWAIRWPAE CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCHH RASDALACPCAHARRHGAFDVARARRDAADDGIRDRARRGAVRLPISRAAARRAGSLRTH HCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VQTLPRLSSPGSHNC HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA