Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812371

Identifier: 237812371

GI number: 237812371

Start: 2096890

End: 2097225

Strand: Reverse

Name: 237812371

Synonym: GBP346_A2119

Alternate gene names: NA

Gene position: 2097225-2096890 (Counterclockwise)

Preceding gene: 237812372

Following gene: 237812370

Centisome position: 51.17

GC content: 58.93

Gene sequence:

>336_bases
TTGGCGCTGCAAACGAAGCTCGAGAAGGAAGTCGAGAATTCGAGATTGGAGGCCGAGAAACGCATTTGTGAGCGGGTGCG
CGAAATCATGGCCGAATATGGAATTGACGTCGAAGTTCGAGCAGGAGGGGGCAGGCGGGAAACGAGACGCCGCGCCGTGC
CTCGGTACTGGAATCCCGAGACAGGCCAGACGTGGTCGGGGCGCGGAGGAGAGCCGAAGTGGATCGTCGGGAAAGATCGG
AGTCAGTTTCTGCTACCAGCGTTTGCGAAACCAAATGAAGTGCCGACTGAGACGGGGGACGATTCGACTGCGGGAAGCGG
AGATGACGACTCGTGA

Upstream 100 bases:

>100_bases
TGTAATTTATGAGGATAACTACGTATTTGGATCGATTTGTATTGGAAAAATGTCGGATGATTGTGGCAGGGGTAGCAAAA
TGATCGCTTTCCGGGAGCTG

Downstream 100 bases:

>100_bases
CTCGTTTCGATTATCCGTCGTCGCACGGGGTGATCTCATCGTGACGAGACGGACTTTCGACCTTCTCAGCGACGATGTCG
AGCTTCTGTTTTCCGGGGGG

Product: BphA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MALQTKLEKEVENSRLEAEKRICERVREIMAEYGIDVEVRAGGGRRETRRRAVPRYWNPETGQTWSGRGGEPKWIVGKDR
SQFLLPAFAKPNEVPTETGDDSTAGSGDDDS

Sequences:

>Translated_111_residues
MALQTKLEKEVENSRLEAEKRICERVREIMAEYGIDVEVRAGGGRRETRRRAVPRYWNPETGQTWSGRGGEPKWIVGKDR
SQFLLPAFAKPNEVPTETGDDSTAGSGDDDS
>Mature_110_residues
ALQTKLEKEVENSRLEAEKRICERVREIMAEYGIDVEVRAGGGRRETRRRAVPRYWNPETGQTWSGRGGEPKWIVGKDRS
QFLLPAFAKPNEVPTETGDDSTAGSGDDDS

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12481; Mature: 12350

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQTKLEKEVENSRLEAEKRICERVREIMAEYGIDVEVRAGGGRRETRRRAVPRYWNPE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCC
TGQTWSGRGGEPKWIVGKDRSQFLLPAFAKPNEVPTETGDDSTAGSGDDDS
CCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALQTKLEKEVENSRLEAEKRICERVREIMAEYGIDVEVRAGGGRRETRRRAVPRYWNPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCC
TGQTWSGRGGEPKWIVGKDRSQFLLPAFAKPNEVPTETGDDSTAGSGDDDS
CCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA