| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812371
Identifier: 237812371
GI number: 237812371
Start: 2096890
End: 2097225
Strand: Reverse
Name: 237812371
Synonym: GBP346_A2119
Alternate gene names: NA
Gene position: 2097225-2096890 (Counterclockwise)
Preceding gene: 237812372
Following gene: 237812370
Centisome position: 51.17
GC content: 58.93
Gene sequence:
>336_bases TTGGCGCTGCAAACGAAGCTCGAGAAGGAAGTCGAGAATTCGAGATTGGAGGCCGAGAAACGCATTTGTGAGCGGGTGCG CGAAATCATGGCCGAATATGGAATTGACGTCGAAGTTCGAGCAGGAGGGGGCAGGCGGGAAACGAGACGCCGCGCCGTGC CTCGGTACTGGAATCCCGAGACAGGCCAGACGTGGTCGGGGCGCGGAGGAGAGCCGAAGTGGATCGTCGGGAAAGATCGG AGTCAGTTTCTGCTACCAGCGTTTGCGAAACCAAATGAAGTGCCGACTGAGACGGGGGACGATTCGACTGCGGGAAGCGG AGATGACGACTCGTGA
Upstream 100 bases:
>100_bases TGTAATTTATGAGGATAACTACGTATTTGGATCGATTTGTATTGGAAAAATGTCGGATGATTGTGGCAGGGGTAGCAAAA TGATCGCTTTCCGGGAGCTG
Downstream 100 bases:
>100_bases CTCGTTTCGATTATCCGTCGTCGCACGGGGTGATCTCATCGTGACGAGACGGACTTTCGACCTTCTCAGCGACGATGTCG AGCTTCTGTTTTCCGGGGGG
Product: BphA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MALQTKLEKEVENSRLEAEKRICERVREIMAEYGIDVEVRAGGGRRETRRRAVPRYWNPETGQTWSGRGGEPKWIVGKDR SQFLLPAFAKPNEVPTETGDDSTAGSGDDDS
Sequences:
>Translated_111_residues MALQTKLEKEVENSRLEAEKRICERVREIMAEYGIDVEVRAGGGRRETRRRAVPRYWNPETGQTWSGRGGEPKWIVGKDR SQFLLPAFAKPNEVPTETGDDSTAGSGDDDS >Mature_110_residues ALQTKLEKEVENSRLEAEKRICERVREIMAEYGIDVEVRAGGGRRETRRRAVPRYWNPETGQTWSGRGGEPKWIVGKDRS QFLLPAFAKPNEVPTETGDDSTAGSGDDDS
Specific function: Unknown
COG id: COG2916
COG function: function code R; DNA-binding protein H-NS
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12481; Mature: 12350
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQTKLEKEVENSRLEAEKRICERVREIMAEYGIDVEVRAGGGRRETRRRAVPRYWNPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCC TGQTWSGRGGEPKWIVGKDRSQFLLPAFAKPNEVPTETGDDSTAGSGDDDS CCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALQTKLEKEVENSRLEAEKRICERVREIMAEYGIDVEVRAGGGRRETRRRAVPRYWNPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCC TGQTWSGRGGEPKWIVGKDRSQFLLPAFAKPNEVPTETGDDSTAGSGDDDS CCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA