| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812361
Identifier: 237812361
GI number: 237812361
Start: 2072196
End: 2072378
Strand: Direct
Name: 237812361
Synonym: GBP346_A2109
Alternate gene names: NA
Gene position: 2072196-2072378 (Clockwise)
Preceding gene: 237812356
Following gene: 237812388
Centisome position: 50.56
GC content: 58.47
Gene sequence:
>183_bases TTGACCGCCGTCAAGCGCCGCGGCAACGGCAATGTTTTGCACCTTATGGCATCCGTCAATCGACACCTCGCGACGGCCGC TATAAAAACGGCAGCGAGGAGCGACATCGAGGTCATGCCCGTCATCCTCAATTTGATGGACGTCACCGCGCCGAAGTCGA AAACCAGGCAGGGCAGTCACTAG
Upstream 100 bases:
>100_bases TGACGGACGTCGTCTGCCATTCGGCGTTGCGCTCCGCATGTAACTTGTCCATAAGCTTCCTGTCAGTGAATTGCCCGGCG CCGTGCGCCGATGGCGGTGC
Downstream 100 bases:
>100_bases GGCGGCCCGAACCACAATCCGAAGCGTCGGCGCCCGCAGCGCGCCATCACGCGTCGGGCTTGGACACGACACCTTGCGCC AGCCGCTCCGCGATGGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MTAVKRRGNGNVLHLMASVNRHLATAAIKTAARSDIEVMPVILNLMDVTAPKSKTRQGSH
Sequences:
>Translated_60_residues MTAVKRRGNGNVLHLMASVNRHLATAAIKTAARSDIEVMPVILNLMDVTAPKSKTRQGSH >Mature_59_residues TAVKRRGNGNVLHLMASVNRHLATAAIKTAARSDIEVMPVILNLMDVTAPKSKTRQGSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6480; Mature: 6349
Theoretical pI: Translated: 12.01; Mature: 12.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVKRRGNGNVLHLMASVNRHLATAAIKTAARSDIEVMPVILNLMDVTAPKSKTRQGSH CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TAVKRRGNGNVLHLMASVNRHLATAAIKTAARSDIEVMPVILNLMDVTAPKSKTRQGSH CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA