| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237812341
Identifier: 237812341
GI number: 237812341
Start: 2053646
End: 2053789
Strand: Reverse
Name: 237812341
Synonym: GBP346_A2089
Alternate gene names: NA
Gene position: 2053789-2053646 (Counterclockwise)
Preceding gene: 237812343
Following gene: 237812338
Centisome position: 50.11
GC content: 68.06
Gene sequence:
>144_bases ATGGAAATCGCTCGCAACTGCGAGAACGACGACGAGCGCTTCGCCGACGTGCGCGAAGCGGGAGCGCGGCCGTCACGAGC GCGACGGGCGCCGCGGCCGATGCGAAGAAACGCGCCGATGAAGCCTTCGCCGCAGTCGAAGTGA
Upstream 100 bases:
>100_bases CGAACTCGTCATGTGGGCGCACGTCCAGCAAGGTGACCAGACCGTCCGCAAGACGCGTGGTCAGTTCATTTCGCGATACC GGCTCCATAGAATCGCGCGC
Downstream 100 bases:
>100_bases ACCGCGCGGGGAATCGTGGAGGCCGGTTGGTTTAAGTTAATGCAGGCACTTCAGCAGCATTTCCGAGTTGCCTGTAGTAG TTTGCCTCAGCGTCGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MEIARNCENDDERFADVREAGARPSRARRAPRPMRRNAPMKPSPQSK
Sequences:
>Translated_47_residues MEIARNCENDDERFADVREAGARPSRARRAPRPMRRNAPMKPSPQSK >Mature_47_residues MEIARNCENDDERFADVREAGARPSRARRAPRPMRRNAPMKPSPQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5423; Mature: 5423
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIARNCENDDERFADVREAGARPSRARRAPRPMRRNAPMKPSPQSK CCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEIARNCENDDERFADVREAGARPSRARRAPRPMRRNAPMKPSPQSK CCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA