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The map label for this gene is 237812340

Identifier: 237812340

GI number: 237812340

Start: 2053336

End: 2053614

Strand: Direct

Name: 237812340

Synonym: GBP346_A2088

Alternate gene names: NA

Gene position: 2053336-2053614 (Clockwise)

Preceding gene: 237812339

Following gene: 237812342

Centisome position: 50.1

GC content: 60.22

Gene sequence:

>279_bases
TTGGCCGAGGCGGGTATCGAGCCGTCCGTCGGCCGCCGTGGCGACAGCTACGATAACGCGCCGGCTGAAACGATCAACGG
CCTCTACAAGACGGACCTGATTCATCGACGCGCCCCGTGGAAAACGAGGCAATCCGTTGAACTGGCGCCCCTGGAATGGG
TGGCCCGGTACAACCATCATCGGCTGATGGAACCGCTCGGCCATATCCCGCCTGCCGACGCTGAGGCAAACTACTACAGG
CAACTCGGAAATGCTGCTGAAGTGCCTGCATTAACTTAA

Upstream 100 bases:

>100_bases
TTGGACAGGCGCTGTACGCGCGCCAACCGGGCGACGATGGGACTTTGATACACCACCCCGATAGGGGGCTCAATACGTCA
GCATTCGGTACAGCGAACGT

Downstream 100 bases:

>100_bases
ACCAACCGGCCTCCACGATTCCCCGCGCGGTTCACTTCGACTGCGGCGAAGGCTTCATCGGCGCGTTTCTTCGCATCGGC
CGCGGCGCCCGTCGCGCTCG

Product: putative IS401 transposase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MAEAGIEPSVGRRGDSYDNAPAETINGLYKTDLIHRRAPWKTRQSVELAPLEWVARYNHHRLMEPLGHIPPADAEANYYR
QLGNAAEVPALT

Sequences:

>Translated_92_residues
MAEAGIEPSVGRRGDSYDNAPAETINGLYKTDLIHRRAPWKTRQSVELAPLEWVARYNHHRLMEPLGHIPPADAEANYYR
QLGNAAEVPALT
>Mature_91_residues
AEAGIEPSVGRRGDSYDNAPAETINGLYKTDLIHRRAPWKTRQSVELAPLEWVARYNHHRLMEPLGHIPPADAEANYYRQ
LGNAAEVPALT

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 10307; Mature: 10175

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAGIEPSVGRRGDSYDNAPAETINGLYKTDLIHRRAPWKTRQSVELAPLEWVARYNHH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
RLMEPLGHIPPADAEANYYRQLGNAAEVPALT
HHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AEAGIEPSVGRRGDSYDNAPAETINGLYKTDLIHRRAPWKTRQSVELAPLEWVARYNHH
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
RLMEPLGHIPPADAEANYYRQLGNAAEVPALT
HHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]