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The map label for this gene is 237812331

Identifier: 237812331

GI number: 237812331

Start: 2047025

End: 2047405

Strand: Reverse

Name: 237812331

Synonym: GBP346_A2079

Alternate gene names: NA

Gene position: 2047405-2047025 (Counterclockwise)

Preceding gene: 237812337

Following gene: 237812330

Centisome position: 49.95

GC content: 61.68

Gene sequence:

>381_bases
GTGCTGTTGCAGCAGGATGGCTGCTTCGCCAACCACAAGCGCATCTGGCGCCTGTACAGCAAGGCGGGACTGAGCGTGCG
CAAGCGGCGGCGCAAGCGTATTGCGGCTGTCGAGCGCACGCCGCTGCCGTTACCAACCGGCCCGAATCAGAGCGGGTCGA
TGGACTTCGTTTCTGACGGGCTGGCCTATGGTCGGCGGTTTCGATACCTGAACGTGGTCGGCGACTACACGCGCGAGTGC
TTGGTTATCGCGGTCGATACATCGCAGCCGGGCCTACGAGTGCAGCAAGTGCTCGAGCGGCTCAAGGAGATGCGAGGCTT
GCCCGCATCCATCACGGTCGACAACGCTCTAAATGCAAGCGGAATGTACAACGCAAGGTAA

Upstream 100 bases:

>100_bases
TCATGCCTGCTTCACTTATCGAGTCCGGCGTGAAGGTATCACGCCGTCGAGTTGACGACGAAGCGCTGACTGGCCGGATG
ATGGCCATCGCCGGATTCAC

Downstream 100 bases:

>100_bases
AACGGGGCCGCGCACACGGCGAGATGCAGTGCGCGAGTTGTCAAAGAGCGAACGACGACCAACCAGTGGTCTTGCGCAGC
ATCGGGCAGGCTTGCTGACC

Product: ISDet2, transposase OrfB

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MLLQQDGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLPTGPNQSGSMDFVSDGLAYGRRFRYLNVVGDYTREC
LVIAVDTSQPGLRVQQVLERLKEMRGLPASITVDNALNASGMYNAR

Sequences:

>Translated_126_residues
MLLQQDGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLPTGPNQSGSMDFVSDGLAYGRRFRYLNVVGDYTREC
LVIAVDTSQPGLRVQQVLERLKEMRGLPASITVDNALNASGMYNAR
>Mature_126_residues
MLLQQDGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLPTGPNQSGSMDFVSDGLAYGRRFRYLNVVGDYTREC
LVIAVDTSQPGLRVQQVLERLKEMRGLPASITVDNALNASGMYNAR

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 14225; Mature: 14225

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQQDGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLPTGPNQSGSMDFVSDG
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
LAYGRRFRYLNVVGDYTRECLVIAVDTSQPGLRVQQVLERLKEMRGLPASITVDNALNAS
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCC
GMYNAR
CCCCCC
>Mature Secondary Structure
MLLQQDGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLPTGPNQSGSMDFVSDG
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
LAYGRRFRYLNVVGDYTRECLVIAVDTSQPGLRVQQVLERLKEMRGLPASITVDNALNAS
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCC
GMYNAR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]