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The map label for this gene is 237812286

Identifier: 237812286

GI number: 237812286

Start: 1981717

End: 1982937

Strand: Direct

Name: 237812286

Synonym: GBP346_A2034

Alternate gene names: NA

Gene position: 1981717-1982937 (Clockwise)

Preceding gene: 237812285

Following gene: 237812287

Centisome position: 48.35

GC content: 68.71

Gene sequence:

>1221_bases
ATGTCGGCTCGCGCGGCCCGGCAGCTTCCCGGCAACCGCCGGCTCGCGCGCCTCGCCGGCGCCGCCGCGGCATGCGCCGC
CGGCTTCGGCGCGAGCACGGCTCACGCGCAAAGCAGCGTCGTGCTGTACGGCCTGATCGATACGTCGATCACCTACGCGA
ACAACCAGCGCACCCACGGAGCCGGCTCGCCGGGAAGCCCCGGCTGGGCCGTGACGAGCGGCGCGCTCAATGCGTCACGC
TGGGGATTGCGCGGCCGCGAAGACCTCGGCGACGGCGTGTCGGCGATCTTCGCGCTCGAGAACGGCTTCTCGGGGGCGAG
CGGCGCGCTATCGCAAAAGGGCGTCGACATGTTCGGCCGGCAGGCATGGATCGGACTGAAATCGAAGGAAGGGGGCGCGC
TCACGCTCGGCCGCCAGTACGACCTCATCCTGGATTTCGTCACGCCGCTCGGCGCGTCGGGGCCCGGCTGGGGCGGCAAC
CTCGCCGTTCACCCGTACGACAACGACGACTCGAACCGCAACATCCGCATCAACAACGCGGTCAAGTACACGAGCCCGAC
ATACCGCGGATGGGCCCTCGGCGCAATGTACGGCTTCTCGAACACGGCGGGCCCGTTCGGCAACAACGCGGCGTGGAGCG
CGGGCCTGTCCTATGCGAACGGCCCGCTGAAACTCGGCGCCGGCTATCTGAGAATCAATCGGAATCCGAACGCCGCGAAC
GCGAACGGCGCGCTGAGCACGACGGACGGCTCGGCGACGATCACGGGCGGCAGCCAGCAGATCTGGGCCGTCGCGGGCCG
CTATGCGTTCGGGCCGCATTCGATCGGCGCCGCGTGGTCCCATTCGGCCACCGACCGCGTGAGCGGCGTGCTCCAGGGCG
CCAGCATCGCGAAGCTCGACGGCAATTCGCTCGTCTTCGACAATTTCACGCTCGACGGGCGCTACGTCGTCACGCCGAGG
TTGAGCCTCGCGGCGGCGTACACGTACACGATGGGCCGCTTCGACGCGCGCTCGGGCGAAACCCGTCCGAAGTGGAATCA
CATGGTCGCGCAAGCCGATTACGCGTTCTCGATCCGCACGGACGCGTATCTCGAGGCCGTCTATCAGCGCGTGAGCGGCG
GCAACGGCATTCCGGCGTTCAACGCGACGATCTGGACGCTGACGCCGTCCGCGAACGGCAATCAGGTCGTTGTCGCGCTG
GGGCTGCGGCATCGGTTCTAG

Upstream 100 bases:

>100_bases
CTCCGTCCGCCAATCGGCGCCCGGGCGCGCACCGCCAATCGCGCCCGCCAACATAACAATTAATATGGATAACCAACGAC
ACAAGACCCTCCGCTCCGGG

Downstream 100 bases:

>100_bases
ACGGCGCGCGGCAGGCGAGGGCGGCCGACCGGCTCGGCGCGCGCGACTCGGCGGTCGCCGCCTCGCGCGCTCATGTGGCT
CGGCGCGGCGCTCCGACGGC

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSARAARQLPGNRRLARLAGAAAACAAGFGASTAHAQSSVVLYGLIDTSITYANNQRTHGAGSPGSPGWAVTSGALNASR
WGLRGREDLGDGVSAIFALENGFSGASGALSQKGVDMFGRQAWIGLKSKEGGALTLGRQYDLILDFVTPLGASGPGWGGN
LAVHPYDNDDSNRNIRINNAVKYTSPTYRGWALGAMYGFSNTAGPFGNNAAWSAGLSYANGPLKLGAGYLRINRNPNAAN
ANGALSTTDGSATITGGSQQIWAVAGRYAFGPHSIGAAWSHSATDRVSGVLQGASIAKLDGNSLVFDNFTLDGRYVVTPR
LSLAAAYTYTMGRFDARSGETRPKWNHMVAQADYAFSIRTDAYLEAVYQRVSGGNGIPAFNATIWTLTPSANGNQVVVAL
GLRHRF

Sequences:

>Translated_406_residues
MSARAARQLPGNRRLARLAGAAAACAAGFGASTAHAQSSVVLYGLIDTSITYANNQRTHGAGSPGSPGWAVTSGALNASR
WGLRGREDLGDGVSAIFALENGFSGASGALSQKGVDMFGRQAWIGLKSKEGGALTLGRQYDLILDFVTPLGASGPGWGGN
LAVHPYDNDDSNRNIRINNAVKYTSPTYRGWALGAMYGFSNTAGPFGNNAAWSAGLSYANGPLKLGAGYLRINRNPNAAN
ANGALSTTDGSATITGGSQQIWAVAGRYAFGPHSIGAAWSHSATDRVSGVLQGASIAKLDGNSLVFDNFTLDGRYVVTPR
LSLAAAYTYTMGRFDARSGETRPKWNHMVAQADYAFSIRTDAYLEAVYQRVSGGNGIPAFNATIWTLTPSANGNQVVVAL
GLRHRF
>Mature_405_residues
SARAARQLPGNRRLARLAGAAAACAAGFGASTAHAQSSVVLYGLIDTSITYANNQRTHGAGSPGSPGWAVTSGALNASRW
GLRGREDLGDGVSAIFALENGFSGASGALSQKGVDMFGRQAWIGLKSKEGGALTLGRQYDLILDFVTPLGASGPGWGGNL
AVHPYDNDDSNRNIRINNAVKYTSPTYRGWALGAMYGFSNTAGPFGNNAAWSAGLSYANGPLKLGAGYLRINRNPNAANA
NGALSTTDGSATITGGSQQIWAVAGRYAFGPHSIGAAWSHSATDRVSGVLQGASIAKLDGNSLVFDNFTLDGRYVVTPRL
SLAAAYTYTMGRFDARSGETRPKWNHMVAQADYAFSIRTDAYLEAVYQRVSGGNGIPAFNATIWTLTPSANGNQVVVALG
LRHRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 42409; Mature: 42277

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARAARQLPGNRRLARLAGAAAACAAGFGASTAHAQSSVVLYGLIDTSITYANNQRTHG
CCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECEEEECCCCCCCC
AGSPGSPGWAVTSGALNASRWGLRGREDLGDGVSAIFALENGFSGASGALSQKGVDMFGR
CCCCCCCCCEEECCCCCHHHCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHCC
QAWIGLKSKEGGALTLGRQYDLILDFVTPLGASGPGWGGNLAVHPYDNDDSNRNIRINNA
EEEEEEECCCCCEEEECCCCEEEHEEHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECCE
VKYTSPTYRGWALGAMYGFSNTAGPFGNNAAWSAGLSYANGPLKLGAGYLRINRNPNAAN
EEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCEEECCEEEEEECCCCCCC
ANGALSTTDGSATITGGSQQIWAVAGRYAFGPHSIGAAWSHSATDRVSGVLQGASIAKLD
CCCCEEECCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEC
GNSLVFDNFTLDGRYVVTPRLSLAAAYTYTMGRFDARSGETRPKWNHMVAQADYAFSIRT
CCEEEEECEEECCEEEECCCCEEEEEEEEEECCEECCCCCCCCCHHHEEEECCEEEEECH
DAYLEAVYQRVSGGNGIPAFNATIWTLTPSANGNQVVVALGLRHRF
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
SARAARQLPGNRRLARLAGAAAACAAGFGASTAHAQSSVVLYGLIDTSITYANNQRTHG
CCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECEEEECCCCCCCC
AGSPGSPGWAVTSGALNASRWGLRGREDLGDGVSAIFALENGFSGASGALSQKGVDMFGR
CCCCCCCCCEEECCCCCHHHCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHCC
QAWIGLKSKEGGALTLGRQYDLILDFVTPLGASGPGWGGNLAVHPYDNDDSNRNIRINNA
EEEEEEECCCCCEEEECCCCEEEHEEHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECCE
VKYTSPTYRGWALGAMYGFSNTAGPFGNNAAWSAGLSYANGPLKLGAGYLRINRNPNAAN
EEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCEEECCEEEEEECCCCCCC
ANGALSTTDGSATITGGSQQIWAVAGRYAFGPHSIGAAWSHSATDRVSGVLQGASIAKLD
CCCCEEECCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEC
GNSLVFDNFTLDGRYVVTPRLSLAAAYTYTMGRFDARSGETRPKWNHMVAQADYAFSIRT
CCEEEEECEEECCEEEECCCCEEEEEEEEEECCEECCCCCCCCCHHHEEEECCEEEEECH
DAYLEAVYQRVSGGNGIPAFNATIWTLTPSANGNQVVVALGLRHRF
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]