| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812256
Identifier: 237812256
GI number: 237812256
Start: 1956340
End: 1956681
Strand: Direct
Name: 237812256
Synonym: GBP346_A2004
Alternate gene names: NA
Gene position: 1956340-1956681 (Clockwise)
Preceding gene: 237812252
Following gene: 237812259
Centisome position: 47.73
GC content: 71.64
Gene sequence:
>342_bases ATGTTCGAGCCGCCGCCGCCCCGTCGCGCGTGCCGCGTCCTCGCGTACCGCGTTCGCATGCAAGGAGCGGACCAGTGGCG GCGTAATCGCCGGGCGGCGCGGCGGCGCGGGCGAGCGGCACGAAAGTGGCAGGAAAGCGGCAAGAAACGGCGCGACGTTT TATGCACCAGTCGGGAAATCGTCCGCACCACGGCGCGCCCGGCATGTCGTGTATGGAGGCATGCGCGCGCCGGACATCGG GATTCAGGCGGCAATTCGATCGGCGCCGCACGCCCGCACGGAACGCGCGCGAACTGCGCGGCAGGCCGCGGCATCGCGTT CGCACGGCGGCAAGCCGCGTAG
Upstream 100 bases:
>100_bases CAGGGAGCGTTTCGTCGAGCGGCAGGGCCGCGCCCGACTGTTTGCCGATTAGTTTCATTCTGAAAATGTTCGAGCCCAAA AAACGGCGAACGCCGCTCCC
Downstream 100 bases:
>100_bases GCGGTGGGGGAAAAGAGGAAAGGCGCGCGCGGGGCTGCGCCTGCCAGCAGGCTCGAGTGCGGCAAGCGTCGCGCCGCACG CGCGACGCGGCGCGGCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MFEPPPPRRACRVLAYRVRMQGADQWRRNRRAARRRGRAARKWQESGKKRRDVLCTSREIVRTTARPACRVWRHARAGHR DSGGNSIGAARPHGTRANCAAGRGIAFARRQAA
Sequences:
>Translated_113_residues MFEPPPPRRACRVLAYRVRMQGADQWRRNRRAARRRGRAARKWQESGKKRRDVLCTSREIVRTTARPACRVWRHARAGHR DSGGNSIGAARPHGTRANCAAGRGIAFARRQAA >Mature_113_residues MFEPPPPRRACRVLAYRVRMQGADQWRRNRRAARRRGRAARKWQESGKKRRDVLCTSREIVRTTARPACRVWRHARAGHR DSGGNSIGAARPHGTRANCAAGRGIAFARRQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12855; Mature: 12855
Theoretical pI: Translated: 12.63; Mature: 12.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEPPPPRRACRVLAYRVRMQGADQWRRNRRAARRRGRAARKWQESGKKRRDVLCTSREI CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRTTARPACRVWRHARAGHRDSGGNSIGAARPHGTRANCAAGRGIAFARRQAA HHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MFEPPPPRRACRVLAYRVRMQGADQWRRNRRAARRRGRAARKWQESGKKRRDVLCTSREI CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRTTARPACRVWRHARAGHRDSGGNSIGAARPHGTRANCAAGRGIAFARRQAA HHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA