Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237812256

Identifier: 237812256

GI number: 237812256

Start: 1956340

End: 1956681

Strand: Direct

Name: 237812256

Synonym: GBP346_A2004

Alternate gene names: NA

Gene position: 1956340-1956681 (Clockwise)

Preceding gene: 237812252

Following gene: 237812259

Centisome position: 47.73

GC content: 71.64

Gene sequence:

>342_bases
ATGTTCGAGCCGCCGCCGCCCCGTCGCGCGTGCCGCGTCCTCGCGTACCGCGTTCGCATGCAAGGAGCGGACCAGTGGCG
GCGTAATCGCCGGGCGGCGCGGCGGCGCGGGCGAGCGGCACGAAAGTGGCAGGAAAGCGGCAAGAAACGGCGCGACGTTT
TATGCACCAGTCGGGAAATCGTCCGCACCACGGCGCGCCCGGCATGTCGTGTATGGAGGCATGCGCGCGCCGGACATCGG
GATTCAGGCGGCAATTCGATCGGCGCCGCACGCCCGCACGGAACGCGCGCGAACTGCGCGGCAGGCCGCGGCATCGCGTT
CGCACGGCGGCAAGCCGCGTAG

Upstream 100 bases:

>100_bases
CAGGGAGCGTTTCGTCGAGCGGCAGGGCCGCGCCCGACTGTTTGCCGATTAGTTTCATTCTGAAAATGTTCGAGCCCAAA
AAACGGCGAACGCCGCTCCC

Downstream 100 bases:

>100_bases
GCGGTGGGGGAAAAGAGGAAAGGCGCGCGCGGGGCTGCGCCTGCCAGCAGGCTCGAGTGCGGCAAGCGTCGCGCCGCACG
CGCGACGCGGCGCGGCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MFEPPPPRRACRVLAYRVRMQGADQWRRNRRAARRRGRAARKWQESGKKRRDVLCTSREIVRTTARPACRVWRHARAGHR
DSGGNSIGAARPHGTRANCAAGRGIAFARRQAA

Sequences:

>Translated_113_residues
MFEPPPPRRACRVLAYRVRMQGADQWRRNRRAARRRGRAARKWQESGKKRRDVLCTSREIVRTTARPACRVWRHARAGHR
DSGGNSIGAARPHGTRANCAAGRGIAFARRQAA
>Mature_113_residues
MFEPPPPRRACRVLAYRVRMQGADQWRRNRRAARRRGRAARKWQESGKKRRDVLCTSREIVRTTARPACRVWRHARAGHR
DSGGNSIGAARPHGTRANCAAGRGIAFARRQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12855; Mature: 12855

Theoretical pI: Translated: 12.63; Mature: 12.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEPPPPRRACRVLAYRVRMQGADQWRRNRRAARRRGRAARKWQESGKKRRDVLCTSREI
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRTTARPACRVWRHARAGHRDSGGNSIGAARPHGTRANCAAGRGIAFARRQAA
HHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MFEPPPPRRACRVLAYRVRMQGADQWRRNRRAARRRGRAARKWQESGKKRRDVLCTSREI
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRTTARPACRVWRHARAGHRDSGGNSIGAARPHGTRANCAAGRGIAFARRQAA
HHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA