| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237812255
Identifier: 237812255
GI number: 237812255
Start: 1955947
End: 1956297
Strand: Reverse
Name: 237812255
Synonym: GBP346_A2003
Alternate gene names: NA
Gene position: 1956297-1955947 (Counterclockwise)
Preceding gene: 237812257
Following gene: 237812254
Centisome position: 47.73
GC content: 70.66
Gene sequence:
>351_bases ATGAAACTAATCGGCAAACAGTCGGGCGCGGCCCTGCCGCTCGACGAAACGCTCCCTGCGCCCGACGCCGCGCCGCTGCG GCTCGACGAATGGCTTCCGTATCAGTTGTTCCTGCCCGCGCAGCATGTCGCGCGCGTGCTCGCCGAGTTCTACGGGCCGC GCTACGGAATCGGTCAGCCGGCGTGGCAGATTCTCGCGACGATCGCCGATCGGCCCGGCACGAACGCGCGGCAGATCGGC GCGGCGCTCGGCATGGACGCGGTGTCGGTCAGCCGGGGGATCGCGCAACTGGTGGGGCCGGTTTCGCGCGGCGCGACGCG GCGCGCAACGATCGCCGCTACGCATGCGTGA
Upstream 100 bases:
>100_bases TGCGAACGCGGTACGCGAGGACGCGGCACGCGCGACGGGGCGGCGGCGGCTCGAACATGGGAGCGGCGTTCGCCGTTTTT TGGGCTCGAACATTTTCAGA
Downstream 100 bases:
>100_bases TGGCGACGCCCGCCGGGCGCGCGGCGTTCGACGACATCGCCGCGGTGTGCATCGCCGTGGAGCGACGCCTGCTCGACGTG CTGAGCCCCGAGGAGCGCGC
Product: transcriptional regulator, MarR family
Products: NA
Alternate protein names: MarR Family Transcriptional Regulator
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MKLIGKQSGAALPLDETLPAPDAAPLRLDEWLPYQLFLPAQHVARVLAEFYGPRYGIGQPAWQILATIADRPGTNARQIG AALGMDAVSVSRGIAQLVGPVSRGATRRATIAATHA
Sequences:
>Translated_116_residues MKLIGKQSGAALPLDETLPAPDAAPLRLDEWLPYQLFLPAQHVARVLAEFYGPRYGIGQPAWQILATIADRPGTNARQIG AALGMDAVSVSRGIAQLVGPVSRGATRRATIAATHA >Mature_116_residues MKLIGKQSGAALPLDETLPAPDAAPLRLDEWLPYQLFLPAQHVARVLAEFYGPRYGIGQPAWQILATIADRPGTNARQIG AALGMDAVSVSRGIAQLVGPVSRGATRRATIAATHA
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12251; Mature: 12251
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIGKQSGAALPLDETLPAPDAAPLRLDEWLPYQLFLPAQHVARVLAEFYGPRYGIGQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCH AWQILATIADRPGTNARQIGAALGMDAVSVSRGIAQLVGPVSRGATRRATIAATHA HHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC >Mature Secondary Structure MKLIGKQSGAALPLDETLPAPDAAPLRLDEWLPYQLFLPAQHVARVLAEFYGPRYGIGQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCH AWQILATIADRPGTNARQIGAALGMDAVSVSRGIAQLVGPVSRGATRRATIAATHA HHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA