| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812238
Identifier: 237812238
GI number: 237812238
Start: 1938952
End: 1939278
Strand: Reverse
Name: 237812238
Synonym: GBP346_A1985
Alternate gene names: NA
Gene position: 1939278-1938952 (Counterclockwise)
Preceding gene: 237812239
Following gene: 237812235
Centisome position: 47.32
GC content: 68.2
Gene sequence:
>327_bases ATGACGATCGGACGATGGAGCGACGCCGCGCGACTGCAGTATCCTGAGCGCGTCGATCTTCCCGGAGCCGCCATGAAACG CTTCCTGTCGTGCGTCGCCCTCGTCTGCTTCGCGCTGCCCGCCGCGCATGCTCAAACGCAGACCTACCACTTCGAAGAAG GCGGCACGACCCCCACGGGCGTCACGTCGCAACCGGCCTCCGCCGCGGCGCAGGCGCGCACGCAGCGGGCAAAGCCGCAT CGGCATCCCGTGCGCCGCAACAAGCATCATCGGACGCACCGCCGCGCTCGCAGCGCGCAGAACGATCGCTTCTATTCGCA GCCGTGA
Upstream 100 bases:
>100_bases TGCAGGCTCGCGCCAAGCGGCGGGCCACCCGCGCCGCCCGCCGCAACGCCGACGCGCGTCGTTGCGGCGCGGTGTTCATT CGGCGGCGCACGGCGGCCCT
Downstream 100 bases:
>100_bases CGCTCGCCGCGCGCGAGCGCGCGGCGAGCGGCGCCATTCATCGACAGCCGTTTGGCCGTCGTAGGTAAGCCGCCGCGTCC GACAGCCGGCGCATGACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTIGRWSDAARLQYPERVDLPGAAMKRFLSCVALVCFALPAAHAQTQTYHFEEGGTTPTGVTSQPASAAAQARTQRAKPH RHPVRRNKHHRTHRRARSAQNDRFYSQP
Sequences:
>Translated_108_residues MTIGRWSDAARLQYPERVDLPGAAMKRFLSCVALVCFALPAAHAQTQTYHFEEGGTTPTGVTSQPASAAAQARTQRAKPH RHPVRRNKHHRTHRRARSAQNDRFYSQP >Mature_107_residues TIGRWSDAARLQYPERVDLPGAAMKRFLSCVALVCFALPAAHAQTQTYHFEEGGTTPTGVTSQPASAAAQARTQRAKPHR HPVRRNKHHRTHRRARSAQNDRFYSQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12146; Mature: 12015
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGRWSDAARLQYPERVDLPGAAMKRFLSCVALVCFALPAAHAQTQTYHFEEGGTTPTG CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC VTSQPASAAAQARTQRAKPHRHPVRRNKHHRTHRRARSAQNDRFYSQP CCCCCHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TIGRWSDAARLQYPERVDLPGAAMKRFLSCVALVCFALPAAHAQTQTYHFEEGGTTPTG CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC VTSQPASAAAQARTQRAKPHRHPVRRNKHHRTHRRARSAQNDRFYSQP CCCCCHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA