| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812227
Identifier: 237812227
GI number: 237812227
Start: 1927272
End: 1927718
Strand: Reverse
Name: 237812227
Synonym: GBP346_A1973
Alternate gene names: NA
Gene position: 1927718-1927272 (Counterclockwise)
Preceding gene: 237812235
Following gene: 237812226
Centisome position: 47.03
GC content: 77.18
Gene sequence:
>447_bases ATGATGCGCGTCGCGCTCGGCATCGGCTGCCGCGCGGGGCGGCCCGCCGAAGCGATCGAGGCCGCGATCCGCGCGGCGCT CGCGCGTCTGCCGCAGGCGTCGCTCGCCGATGTCGGCGTCGTCGCGACGCTCGACGCGAAAGCGCGCGAACCGGGCCTCG TCGCATGCTGCGCACGCCACGGCTGGCCGCTCGTCGCGTTTTCGCGCGACGAGATCGCCGCGCACCTCGCTCGTCTAGCC GGTCTCGCCCGTGCCGGTTCCGATTCCGGTTCCGGCTCCGGCGCATCGCCCGCGCCGGGCGCCCCGCCGTGCGCCGCCGC GCGCGCGCGCTTCGGCGTCGACGGCGTGTGCGAGCCGTGCGCATGCCTTGCCGCGCCGAACGGCGCGCTCATCGTGCGCA AGCTCGCGCTCGACGGCGTGACGGCCGCGCTCGCGGGCCCGCTGTGA
Upstream 100 bases:
>100_bases GCCCGGCCGGCAAGCCGGGCGCCGAACGCCAAGACCGCATGATTCGATCCGATCCACGCCCCCGACTCCCGCGCGAGCGC GACGCGCGCGCGGCCGCCCG
Downstream 100 bases:
>100_bases CGCGCGCCGCGCGCGGTCTTCCGATTCACGAACCCAACGACTCACAGGACTCCAGCCGATGAAAACCGATTCCGAATCGC ATCAACGCATGGCCGAGCGC
Product: cobalamin biosynthesis protein CbiG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MMRVALGIGCRAGRPAEAIEAAIRAALARLPQASLADVGVVATLDAKAREPGLVACCARHGWPLVAFSRDEIAAHLARLA GLARAGSDSGSGSGASPAPGAPPCAAARARFGVDGVCEPCACLAAPNGALIVRKLALDGVTAALAGPL
Sequences:
>Translated_148_residues MMRVALGIGCRAGRPAEAIEAAIRAALARLPQASLADVGVVATLDAKAREPGLVACCARHGWPLVAFSRDEIAAHLARLA GLARAGSDSGSGSGASPAPGAPPCAAARARFGVDGVCEPCACLAAPNGALIVRKLALDGVTAALAGPL >Mature_148_residues MMRVALGIGCRAGRPAEAIEAAIRAALARLPQASLADVGVVATLDAKAREPGLVACCARHGWPLVAFSRDEIAAHLARLA GLARAGSDSGSGSGASPAPGAPPCAAARARFGVDGVCEPCACLAAPNGALIVRKLALDGVTAALAGPL
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14541; Mature: 14541
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRVALGIGCRAGRPAEAIEAAIRAALARLPQASLADVGVVATLDAKAREPGLVACCARH CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEECCC GWPLVAFSRDEIAAHLARLAGLARAGSDSGSGSGASPAPGAPPCAAARARFGVDGVCEPC CCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCH ACLAAPNGALIVRKLALDGVTAALAGPL HHHCCCCCCEEHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMRVALGIGCRAGRPAEAIEAAIRAALARLPQASLADVGVVATLDAKAREPGLVACCARH CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEECCC GWPLVAFSRDEIAAHLARLAGLARAGSDSGSGSGASPAPGAPPCAAARARFGVDGVCEPC CCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCH ACLAAPNGALIVRKLALDGVTAALAGPL HHHCCCCCCEEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA