| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812217
Identifier: 237812217
GI number: 237812217
Start: 1901413
End: 1901988
Strand: Reverse
Name: 237812217
Synonym: GBP346_A1963
Alternate gene names: NA
Gene position: 1901988-1901413 (Counterclockwise)
Preceding gene: 237812218
Following gene: 237812199
Centisome position: 46.41
GC content: 69.79
Gene sequence:
>576_bases ATGTCGCCGACCGCGCTGCTCGTTCCGACGTTCACGCACATGCTGCAGAGTTTGTCCGCGTGGCTCGACAAGGCCGCCGC GCACCAGCGGGCATTGGGCGCCGAGCCCGACGATGTGCTGACGAAGCGGCTCGCCGCCGATATGTTCGTGCTTGCCGCGC AAATCCGCTTCACGGCCTTTCAGGCGCAGGAGCCCGTCTATCGCCTGCGCGGCGACGCGCTTCCCGAATCGTTGCTGGAG GTGCGGCGCGCGGGATGGCAGGCGGACGCCGCGCCCGGCTCGCTGCGCGATGCGCAGGCCTGCCTCGCCGATGCGCGCGC CTTGCTCGCCGGGCTGGCGCCGCACGCGCTCGACGAAGGCGCCGAGCGGCCGATCGCGCTCGAGCTGCCCAACGGCGCGG TGTTCGACATGACGGGCGAGCAGTACCTGCGCGACTGGGCGCTGCCGCAGTTCTATTTCCACGCGATCGCCGCGTATGCG ATTCTGCGCCATCACGGCGTCGCGCTGGGCAAGCCGGACTATGTCTCGCACATGTTCGCGTACCTTCGGCCCGGGACGAT GCCGCAAGATCGGTAG
Upstream 100 bases:
>100_bases TCGTTGCCGTTCAGCGCCGGTCGCCTGCGCACGCCGTTCGTCGCCGTTCGCCGCCGTTCGCTGGTATCGTTGCACGCACG ACACCTTCCGGAGATCGCTC
Downstream 100 bases:
>100_bases CCGCGCATCGGGCGAACGTCCGACAGTTGCGACCCGGAGCCTGGGATCCGGAGCCTGCGGTCGTTTCTCGCTTCTCGTTT CTCGTTTCTCGCTTCTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSPTALLVPTFTHMLQSLSAWLDKAAAHQRALGAEPDDVLTKRLAADMFVLAAQIRFTAFQAQEPVYRLRGDALPESLLE VRRAGWQADAAPGSLRDAQACLADARALLAGLAPHALDEGAERPIALELPNGAVFDMTGEQYLRDWALPQFYFHAIAAYA ILRHHGVALGKPDYVSHMFAYLRPGTMPQDR
Sequences:
>Translated_191_residues MSPTALLVPTFTHMLQSLSAWLDKAAAHQRALGAEPDDVLTKRLAADMFVLAAQIRFTAFQAQEPVYRLRGDALPESLLE VRRAGWQADAAPGSLRDAQACLADARALLAGLAPHALDEGAERPIALELPNGAVFDMTGEQYLRDWALPQFYFHAIAAYA ILRHHGVALGKPDYVSHMFAYLRPGTMPQDR >Mature_190_residues SPTALLVPTFTHMLQSLSAWLDKAAAHQRALGAEPDDVLTKRLAADMFVLAAQIRFTAFQAQEPVYRLRGDALPESLLEV RRAGWQADAAPGSLRDAQACLADARALLAGLAPHALDEGAERPIALELPNGAVFDMTGEQYLRDWALPQFYFHAIAAYAI LRHHGVALGKPDYVSHMFAYLRPGTMPQDR
Specific function: Unknown
COG id: COG3812
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20946; Mature: 20815
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTALLVPTFTHMLQSLSAWLDKAAAHQRALGAEPDDVLTKRLAADMFVLAAQIRFTAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QAQEPVYRLRGDALPESLLEVRRAGWQADAAPGSLRDAQACLADARALLAGLAPHALDEG HHHCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHC AERPIALELPNGAVFDMTGEQYLRDWALPQFYFHAIAAYAILRHHGVALGKPDYVSHMFA CCCCEEEECCCCCEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH YLRPGTMPQDR HHCCCCCCCCC >Mature Secondary Structure SPTALLVPTFTHMLQSLSAWLDKAAAHQRALGAEPDDVLTKRLAADMFVLAAQIRFTAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QAQEPVYRLRGDALPESLLEVRRAGWQADAAPGSLRDAQACLADARALLAGLAPHALDEG HHHCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHC AERPIALELPNGAVFDMTGEQYLRDWALPQFYFHAIAAYAILRHHGVALGKPDYVSHMFA CCCCEEEECCCCCEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH YLRPGTMPQDR HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA