| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812133
Identifier: 237812133
GI number: 237812133
Start: 1821533
End: 1822267
Strand: Reverse
Name: 237812133
Synonym: GBP346_A1879
Alternate gene names: NA
Gene position: 1822267-1821533 (Counterclockwise)
Preceding gene: 237812134
Following gene: 237812131
Centisome position: 44.46
GC content: 68.16
Gene sequence:
>735_bases TTGAATTCCATCGCGCGCCCGCGAGGGCGTTTCCTGAAGCCGGTCGCGATCGGCATCGCGTTGATCGTTGTCGCGGCCGT TGCCTTGTATGCGTATGCATCGCCTTATCTCGCGCTCAGGCAGATGAAGCAGGCCATCGACGCGCGCGACGCACAGGCGA TCAGCGTCCACGTCGATTTCCCCGCGCTGCGGATCAGCCTGAAGCAGCAGTTGACCGACGAATTGATGCGTCGCATCGAT GCGCAAAAGCGCGACAATCCGCTCGCGATCCTCGGCGCGATGATCGGCTCCGCGCTCGTCGGTCCGCTCGTCGATGCGTA TGCGACGCCCGATGGCGTCGCCGCGCTGATGAGCGGCCTGCCGCCGCACGCGCGGCCCGGGCAACGGCCGCCCGAGCTGA ATCCGCCAAGCGATCCCGCGAGCGCGGCGGCAGCCGGCACTGGCGCACCGCCGAGCAACGCAGGCGTGCCCGGCTCGGCG AGCGGCGCGGCGAAGCAGACCGCATCTGCGGCCGCGGCGAGCACATCGGGCGCATCGGGCACATCAGGTACGCCGCCCGG CGCACCGAGCGCGACGCCCGGCCCGTCGCCGCAAACAAGCGCCGGCTATCGCGGTTTCGATGAATTCGTCGTTACGTATC GCCGCGACGACGGCAGCGCGCGCTATGCGGCGGTCTTTCGCCGCAGCGGGATCTTTGGCTGGAAGTTGTCGGCAATCGAT TTGCACGACGATTGA
Upstream 100 bases:
>100_bases CGCGATCTGCCGAATGATCGATCGATGCATCGCCGAGGAACGTTCGCTGACGCAGCAGGGTCTGTGATGGCCTAGCCGTT CGTTTCGCCGGGGAGGCCAT
Downstream 100 bases:
>100_bases GTTCGGCTCGGCGCTGGGGGGCGTAACACGCGCGAGGGCGACAGGTGCGCGGCGACGCGTGTCGGCGCATGTCGAGCGCG GCGTGATGGGATGTGAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MNSIARPRGRFLKPVAIGIALIVVAAVALYAYASPYLALRQMKQAIDARDAQAISVHVDFPALRISLKQQLTDELMRRID AQKRDNPLAILGAMIGSALVGPLVDAYATPDGVAALMSGLPPHARPGQRPPELNPPSDPASAAAAGTGAPPSNAGVPGSA SGAAKQTASAAAASTSGASGTSGTPPGAPSATPGPSPQTSAGYRGFDEFVVTYRRDDGSARYAAVFRRSGIFGWKLSAID LHDD
Sequences:
>Translated_244_residues MNSIARPRGRFLKPVAIGIALIVVAAVALYAYASPYLALRQMKQAIDARDAQAISVHVDFPALRISLKQQLTDELMRRID AQKRDNPLAILGAMIGSALVGPLVDAYATPDGVAALMSGLPPHARPGQRPPELNPPSDPASAAAAGTGAPPSNAGVPGSA SGAAKQTASAAAASTSGASGTSGTPPGAPSATPGPSPQTSAGYRGFDEFVVTYRRDDGSARYAAVFRRSGIFGWKLSAID LHDD >Mature_244_residues MNSIARPRGRFLKPVAIGIALIVVAAVALYAYASPYLALRQMKQAIDARDAQAISVHVDFPALRISLKQQLTDELMRRID AQKRDNPLAILGAMIGSALVGPLVDAYATPDGVAALMSGLPPHARPGQRPPELNPPSDPASAAAAGTGAPPSNAGVPGSA SGAAKQTASAAAASTSGASGTSGTPPGAPSATPGPSPQTSAGYRGFDEFVVTYRRDDGSARYAAVFRRSGIFGWKLSAID LHDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24967; Mature: 24967
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIARPRGRFLKPVAIGIALIVVAAVALYAYASPYLALRQMKQAIDARDAQAISVHVDF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC PALRISLKQQLTDELMRRIDAQKRDNPLAILGAMIGSALVGPLVDAYATPDGVAALMSGL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC PPHARPGQRPPELNPPSDPASAAAAGTGAPPSNAGVPGSASGAAKQTASAAAASTSGASG CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC TSGTPPGAPSATPGPSPQTSAGYRGFDEFVVTYRRDDGSARYAAVFRRSGIFGWKLSAID CCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHCCCCEEEEEEEC LHDD CCCC >Mature Secondary Structure MNSIARPRGRFLKPVAIGIALIVVAAVALYAYASPYLALRQMKQAIDARDAQAISVHVDF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC PALRISLKQQLTDELMRRIDAQKRDNPLAILGAMIGSALVGPLVDAYATPDGVAALMSGL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC PPHARPGQRPPELNPPSDPASAAAAGTGAPPSNAGVPGSASGAAKQTASAAAASTSGASG CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC TSGTPPGAPSATPGPSPQTSAGYRGFDEFVVTYRRDDGSARYAAVFRRSGIFGWKLSAID CCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHCCCCEEEEEEEC LHDD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA