| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812112
Identifier: 237812112
GI number: 237812112
Start: 1804001
End: 1804159
Strand: Direct
Name: 237812112
Synonym: GBP346_A1857
Alternate gene names: NA
Gene position: 1804001-1804159 (Clockwise)
Preceding gene: 237812111
Following gene: 237812114
Centisome position: 44.02
GC content: 74.84
Gene sequence:
>159_bases ATGACGCGCAAGCGTCGATTCGCCGGCATGCGCGCCGATCGACATCGAAGGCCGCATGGCTGCCCGCATCGGCGACGCGA CGCGGCGAGCGCTCGCCGCGTCGCGAGACGGGCGGCCGCCGCTCCTCGGCCTAACGTCGGGCGCGCGACGCGCGCATGA
Upstream 100 bases:
>100_bases ATATGAGCGGGGGCGAGCAGGGCGTGGGCGCGATCGCTTCGAGCGATCGATTGCGATCGATTCGCTGAAGCAAGCTTCGC CGAAAAGAAGATTTGCCGGC
Downstream 100 bases:
>100_bases CGCGCATCGCGCGCGTTACGCGTCGTCGCTGCCGCCGTCGTCCGACATGAACGCTCGCATGAACACGAGCGCGCCCCAGC CCCAGACCGCGTTCGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MTRKRRFAGMRADRHRRPHGCPHRRRDAASARRVARRAAAAPRPNVGRATRA
Sequences:
>Translated_52_residues MTRKRRFAGMRADRHRRPHGCPHRRRDAASARRVARRAAAAPRPNVGRATRA >Mature_51_residues TRKRRFAGMRADRHRRPHGCPHRRRDAASARRVARRAAAAPRPNVGRATRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5970; Mature: 5839
Theoretical pI: Translated: 13.01; Mature: 13.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKRRFAGMRADRHRRPHGCPHRRRDAASARRVARRAAAAPRPNVGRATRA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TRKRRFAGMRADRHRRPHGCPHRRRDAASARRVARRAAAAPRPNVGRATRA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA