| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is aat [H]
Identifier: 237812106
GI number: 237812106
Start: 1799666
End: 1800433
Strand: Reverse
Name: aat [H]
Synonym: GBP346_A1850
Alternate gene names: 237812106
Gene position: 1800433-1799666 (Counterclockwise)
Preceding gene: 237812107
Following gene: 237812105
Centisome position: 43.93
GC content: 69.4
Gene sequence:
>768_bases ATGGTTCCGTGGCTCGGCCCAGACGATCCGTTTCCGAGCGTCGAGCGCGCGCTCGGCACGGCGAGCGGCGCGCCCGGCCT GCTCGCCGCGAGCGCGGACCTGCTGCCGTCGCGCCTCATCGACGCGTACCGGCGCGGCATCTTCCCGTGGTATTCGGACG GCCAGCCGGTGCTCTGGTGGAGTCCCGATCCGCGGATGATTCTCGTGCCCGCCGAATTCAGGATCTCGGCGACCTTCAGG AAGACGCTCAAGCGCGTGCTGCGCGAGCCGCGCTGGGAAATCCGCGTCGACTGCGATTTCGCCGGCGTGATGCGCGCGTG CGCGCAGGCGCCGCGGCGCGGGCAGCGCGGCACGTGGATCACCGCGGAGATCATCGACGCCTATTCGTCGCTGCACCGCG CGGGCGACGCGCACAGCATCGAAACCTGGCTCGACGGCCGCCGCGTAGGCGGCCTGTACGGCGTATCGTTCGGCCGGATG TTCTTCGGCGAATCGATGTACGCGCACGCGAGCGACGCGTCGAAAATCGCGCTCGCCGCGCTCGTCGCGCACCTACGCGA GCACAGGGTAGAAATGATAGACTGCCAGCAAAACACGTCGCATCTGGCGTCGCTCGGCGGCCGCGAGATCGCGCGCAAGA CATTCGTCGCCCACGTGCGCCGCGCCGTCGCCGAGCCGCCGATACCATGGCGGTTCGACAAGCGCGTCGTCGCCGGATTG CTCGGCCAAGCCGCTTCGGCCACCGCAGCGGATGCGTTCGATCGTTAG
Upstream 100 bases:
>100_bases GCCAGACGCTGCGATTCTTCTTCGCAGACCGCGAGGCGGGCGACTATGGCGTCCACACGGGCGACATCTTCCGTTCGCTG CGCAACGGCTAGGCGCGCGC
Downstream 100 bases:
>100_bases CGCGGCAAAACATCAATACATCGAGAGCTGCCCATGACTCATCCCACTGAGCTGCCGCTTTCACCGCTTTCGGCGTTGCA ATTCTATGCAACGGCCCCCT
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MVPWLGPDDPFPSVERALGTASGAPGLLAASADLLPSRLIDAYRRGIFPWYSDGQPVLWWSPDPRMILVPAEFRISATFR KTLKRVLREPRWEIRVDCDFAGVMRACAQAPRRGQRGTWITAEIIDAYSSLHRAGDAHSIETWLDGRRVGGLYGVSFGRM FFGESMYAHASDASKIALAALVAHLREHRVEMIDCQQNTSHLASLGGREIARKTFVAHVRRAVAEPPIPWRFDKRVVAGL LGQAASATAADAFDR
Sequences:
>Translated_255_residues MVPWLGPDDPFPSVERALGTASGAPGLLAASADLLPSRLIDAYRRGIFPWYSDGQPVLWWSPDPRMILVPAEFRISATFR KTLKRVLREPRWEIRVDCDFAGVMRACAQAPRRGQRGTWITAEIIDAYSSLHRAGDAHSIETWLDGRRVGGLYGVSFGRM FFGESMYAHASDASKIALAALVAHLREHRVEMIDCQQNTSHLASLGGREIARKTFVAHVRRAVAEPPIPWRFDKRVVAGL LGQAASATAADAFDR >Mature_255_residues MVPWLGPDDPFPSVERALGTASGAPGLLAASADLLPSRLIDAYRRGIFPWYSDGQPVLWWSPDPRMILVPAEFRISATFR KTLKRVLREPRWEIRVDCDFAGVMRACAQAPRRGQRGTWITAEIIDAYSSLHRAGDAHSIETWLDGRRVGGLYGVSFGRM FFGESMYAHASDASKIALAALVAHLREHRVEMIDCQQNTSHLASLGGREIARKTFVAHVRRAVAEPPIPWRFDKRVVAGL LGQAASATAADAFDR
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=211, Percent_Identity=42.654028436019, Blast_Score=172, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 28236; Mature: 28236
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPWLGPDDPFPSVERALGTASGAPGLLAASADLLPSRLIDAYRRGIFPWYSDGQPVLWW CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE SPDPRMILVPAEFRISATFRKTLKRVLREPRWEIRVDCDFAGVMRACAQAPRRGQRGTWI CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEE TAEIIDAYSSLHRAGDAHSIETWLDGRRVGGLYGVSFGRMFFGESMYAHASDASKIALAA HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHH LVAHLREHRVEMIDCQQNTSHLASLGGREIARKTFVAHVRRAVAEPPIPWRFDKRVVAGL HHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LGQAASATAADAFDR HHHHHHHHHHHHCCC >Mature Secondary Structure MVPWLGPDDPFPSVERALGTASGAPGLLAASADLLPSRLIDAYRRGIFPWYSDGQPVLWW CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE SPDPRMILVPAEFRISATFRKTLKRVLREPRWEIRVDCDFAGVMRACAQAPRRGQRGTWI CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEE TAEIIDAYSSLHRAGDAHSIETWLDGRRVGGLYGVSFGRMFFGESMYAHASDASKIALAA HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHH LVAHLREHRVEMIDCQQNTSHLASLGGREIARKTFVAHVRRAVAEPPIPWRFDKRVVAGL HHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LGQAASATAADAFDR HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA