| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812101
Identifier: 237812101
GI number: 237812101
Start: 1795550
End: 1795876
Strand: Reverse
Name: 237812101
Synonym: GBP346_A1844
Alternate gene names: NA
Gene position: 1795876-1795550 (Counterclockwise)
Preceding gene: 237812102
Following gene: 237812091
Centisome position: 43.82
GC content: 76.76
Gene sequence:
>327_bases GTGCCCACGCGCCGCGAAACCAGGGCGCGCATCGAGAAAGCGCGACAGCGCGCACGCGCGGCGCAAGCCGGCCATGCGCC CTCGCGCGATGCGCCATTCGCCGTCAATGACGGCACGCGGCGGCAAGCGCTGCGCGCGCCCAAGGCTCCGACGCCTGTGC GCCCGTCGGGCGCCGGCCGCCTCGCGCATCCGAGCATCGACGCGAACGAAGCGGCGCGCCGGCCGCGCGGCCCCCCCACT ACCCCAGCTGCATGCGCCGCATGCGCGCCGCCGCGAACGCGGCGCGCGCGACCCCAAGCAGGCGGCGCCCGTCAATCCAT CGGATAG
Upstream 100 bases:
>100_bases GCCGGCACTGAACGGGGGCCGCGCGACGCGGGCGCCGCGTCATCGGCGGGCCGGCGGCTCGCAGCGCGGGGGCAAGCCGC CCGACGATGCGCGATGACGC
Downstream 100 bases:
>100_bases CGCACGCCGAGCGCCGCGCGCGCGGCGTCCGTCATCGCGATCATCCGCCGCGAATGATCGTGCGTCATCACCGGGCTTTC GAGCTCGCCCGCACGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MPTRRETRARIEKARQRARAAQAGHAPSRDAPFAVNDGTRRQALRAPKAPTPVRPSGAGRLAHPSIDANEAARRPRGPPT TPAACAACAPPRTRRARPQAGGARQSIG
Sequences:
>Translated_108_residues MPTRRETRARIEKARQRARAAQAGHAPSRDAPFAVNDGTRRQALRAPKAPTPVRPSGAGRLAHPSIDANEAARRPRGPPT TPAACAACAPPRTRRARPQAGGARQSIG >Mature_107_residues PTRRETRARIEKARQRARAAQAGHAPSRDAPFAVNDGTRRQALRAPKAPTPVRPSGAGRLAHPSIDANEAARRPRGPPTT PAACAACAPPRTRRARPQAGGARQSIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11425; Mature: 11294
Theoretical pI: Translated: 12.63; Mature: 12.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRRETRARIEKARQRARAAQAGHAPSRDAPFAVNDGTRRQALRAPKAPTPVRPSGAGR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCC LAHPSIDANEAARRPRGPPTTPAACAACAPPRTRRARPQAGGARQSIG CCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PTRRETRARIEKARQRARAAQAGHAPSRDAPFAVNDGTRRQALRAPKAPTPVRPSGAGR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCC LAHPSIDANEAARRPRGPPTTPAACAACAPPRTRRARPQAGGARQSIG CCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA