Click here to switch to the map view.

The map label for this gene is yulF [H]

Identifier: 237812100

GI number: 237812100

Start: 1794582

End: 1795565

Strand: Direct

Name: yulF [H]

Synonym: GBP346_A1845

Alternate gene names: 237812100

Gene position: 1794582-1795565 (Clockwise)

Preceding gene: 237812099

Following gene: 237812108

Centisome position: 43.79

GC content: 70.02

Gene sequence:

>984_bases
ATGACCGATCATCAACCGACGCCGATTCGCTTCGGCATCGTCGGCGCGGGCAGCATCGCGCGCCGGTTCGCGCACAGCAT
CGCGCACGTGCGTGTTGCCGAGCTATCGCGCATATGGGCACGCCGCGCCGACGCAGCCGCCGCGTTCTGCGCCGCGCATG
GCGGCGCGCCGTGTGACAGCGTCGACGCGCTCCTCGCATCCGACATCGACGCCGTCTACATCGCCACGCTGAACGACAGC
CACGCGCATTACGCGCGCACGGCGCTCGCGGCCGGCAAGGCGGTGCTCTGCGAAAAGCCCGCGACGGTCAACGCGCGCGA
GCTCGAAACGGTGCTCGACGCCGCGCACGCGGCGAAGCGCCTGTTCATGGAGGCGATGAAGCCGCCGTTCTATCCGCTGT
ACCGGAAGCTGCGCGCGCATCTCGAGCGCGATCCGATCGGCGAGATCGCGCTCGTGCGCGCGGGCTGCGCGTCGTCGAGG
GTGCCGGCCGATCATCCCGTCTATCGTTTCGAGCAGGCGGGCGGCGCGCTGCTCGACATCGGCGTCTACGAGATGTTCCT
TGCCGTCGACTGGCTCGGCGCGCCGCTCGATGTGCAGACGCTCGGGCGCGTCGGCGCGACGGGCGTCGACGTGTTCGCGA
GCGTCAACGCGCGGCACGCGCGCGGCGTGTCGCAACTGTTCTGCGGGCTCGACGTGATGGGGCGCGGCGATGCGCTGCTC
GCGGCGCCGGGCGGCTACGTGACGATTCACGAGAACTGGTGGAATCCGGCGCGCGCGACGATCCGCTATGCGGACGGCCG
CGTCGTCGAGCTCGACGAGCCGTTCGACGGCGGCGGCCTCAATTACGAGATCGCGCATTTCTGCGAGCTGCTGCGTGCGG
GCGAGCTCGAAAGCCCGGTGATGACGCACGATCATTCGCGGCGGATGATCGCGATGACGGACGCCGCGCGCGCGGCGCTC
GGCGTGCGCTATCCGATGGATTGA

Upstream 100 bases:

>100_bases
AGCGCCATGCGTGTCGCGCGCCGCGGGCCGGCCGTTATCATGACGGCCGGCCGGGCGCGAGCCCGGTGCCGGCCTCTTTC
TGCGACACGGAATGGATTCA

Downstream 100 bases:

>100_bases
CGGGCGCCGCCTGCTTGGGGTCGCGCGCGCCGCGTTCGCGGCGGCGCGCATGCGGCGCATGCAGCTGGGGTAGTGGGGGG
GCCGCGCGGCCGGCGCGCCG

Product: oxidoreductase, NAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTDHQPTPIRFGIVGAGSIARRFAHSIAHVRVAELSRIWARRADAAAAFCAAHGGAPCDSVDALLASDIDAVYIATLNDS
HAHYARTALAAGKAVLCEKPATVNARELETVLDAAHAAKRLFMEAMKPPFYPLYRKLRAHLERDPIGEIALVRAGCASSR
VPADHPVYRFEQAGGALLDIGVYEMFLAVDWLGAPLDVQTLGRVGATGVDVFASVNARHARGVSQLFCGLDVMGRGDALL
AAPGGYVTIHENWWNPARATIRYADGRVVELDEPFDGGGLNYEIAHFCELLRAGELESPVMTHDHSRRMIAMTDAARAAL
GVRYPMD

Sequences:

>Translated_327_residues
MTDHQPTPIRFGIVGAGSIARRFAHSIAHVRVAELSRIWARRADAAAAFCAAHGGAPCDSVDALLASDIDAVYIATLNDS
HAHYARTALAAGKAVLCEKPATVNARELETVLDAAHAAKRLFMEAMKPPFYPLYRKLRAHLERDPIGEIALVRAGCASSR
VPADHPVYRFEQAGGALLDIGVYEMFLAVDWLGAPLDVQTLGRVGATGVDVFASVNARHARGVSQLFCGLDVMGRGDALL
AAPGGYVTIHENWWNPARATIRYADGRVVELDEPFDGGGLNYEIAHFCELLRAGELESPVMTHDHSRRMIAMTDAARAAL
GVRYPMD
>Mature_326_residues
TDHQPTPIRFGIVGAGSIARRFAHSIAHVRVAELSRIWARRADAAAAFCAAHGGAPCDSVDALLASDIDAVYIATLNDSH
AHYARTALAAGKAVLCEKPATVNARELETVLDAAHAAKRLFMEAMKPPFYPLYRKLRAHLERDPIGEIALVRAGCASSRV
PADHPVYRFEQAGGALLDIGVYEMFLAVDWLGAPLDVQTLGRVGATGVDVFASVNARHARGVSQLFCGLDVMGRGDALLA
APGGYVTIHENWWNPARATIRYADGRVVELDEPFDGGGLNYEIAHFCELLRAGELESPVMTHDHSRRMIAMTDAARAALG
VRYPMD

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=331, Percent_Identity=31.1178247734139, Blast_Score=126, Evalue=2e-29,
Organism=Escherichia coli, GI145693182, Length=211, Percent_Identity=29.3838862559242, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787574, Length=198, Percent_Identity=28.7878787878788, Blast_Score=63, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581117, Length=335, Percent_Identity=28.3582089552239, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24584727, Length=270, Percent_Identity=28.5185185185185, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24581115, Length=331, Percent_Identity=27.4924471299094, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35291; Mature: 35159

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHQPTPIRFGIVGAGSIARRFAHSIAHVRVAELSRIWARRADAAAAFCAAHGGAPCDS
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VDALLASDIDAVYIATLNDSHAHYARTALAAGKAVLCEKPATVNARELETVLDAAHAAKR
HHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
LFMEAMKPPFYPLYRKLRAHLERDPIGEIALVRAGCASSRVPADHPVYRFEQAGGALLDI
HHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEH
GVYEMFLAVDWLGAPLDVQTLGRVGATGVDVFASVNARHARGVSQLFCGLDVMGRGDALL
HHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHECCCCHHHCCHHHHHHCCCCCCCCCEEE
AAPGGYVTIHENWWNPARATIRYADGRVVELDEPFDGGGLNYEIAHFCELLRAGELESPV
ECCCCEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCC
MTHDHSRRMIAMTDAARAALGVRYPMD
CCCCCCCEEEEEEHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDHQPTPIRFGIVGAGSIARRFAHSIAHVRVAELSRIWARRADAAAAFCAAHGGAPCDS
CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VDALLASDIDAVYIATLNDSHAHYARTALAAGKAVLCEKPATVNARELETVLDAAHAAKR
HHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
LFMEAMKPPFYPLYRKLRAHLERDPIGEIALVRAGCASSRVPADHPVYRFEQAGGALLDI
HHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEH
GVYEMFLAVDWLGAPLDVQTLGRVGATGVDVFASVNARHARGVSQLFCGLDVMGRGDALL
HHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHECCCCHHHCCHHHHHHCCCCCCCCCEEE
AAPGGYVTIHENWWNPARATIRYADGRVVELDEPFDGGGLNYEIAHFCELLRAGELESPV
ECCCCEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCC
MTHDHSRRMIAMTDAARAALGVRYPMD
CCCCCCCEEEEEEHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]