| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812056
Identifier: 237812056
GI number: 237812056
Start: 1750961
End: 1751422
Strand: Reverse
Name: 237812056
Synonym: GBP346_A1798
Alternate gene names: NA
Gene position: 1751422-1750961 (Counterclockwise)
Preceding gene: 237812058
Following gene: 237812049
Centisome position: 42.73
GC content: 63.42
Gene sequence:
>462_bases ATGTTTCAAATGACTCGTTCACTGCGCTCGATCACCGTGGCAGGCGCGCTTCTCGCCTGCGCCGCGAGCGCGTTCGCTCA AGCGGACAGCCCGGTCGGCATGTGGCAGACCATCGACGATCACACGGGCAAGCCGAAGGCGCTCGTGCAGATCAGCGCAG ATTCGAACGGCGAGCTGTCGGGCAAGGTCGTCAAGGGCCTCGGCGAGAACGACACGCCGGATCGCCGCTGCACCGCCTGC ACCGACGAGCGCAAGGATCAGCTCATCAAGGGCATGACGATCATCAAGGCGATGAAGAAGGACGGCGAAGGCTGGGACGG CGGCAACATCCTCGACCCGGAAAACGGCAAGGTCTACAAATGCAAGATGAAGCTCGAGGACGGCGGCCAGAAGCTCGTCG TGCGCGGCTACATCGGCGTGTCGCTGCTCGGCCGCTCGCAGACGTGGATGCGCTCGCAATAA
Upstream 100 bases:
>100_bases CGGATTCACGTATTCTGCGCACAGCTCGCATGCATCGCCGTCCGACGCAGACGGCCCGCGAGCTGACGAAAACGACATCG TGCGATCCAAGGAGGAAGAC
Downstream 100 bases:
>100_bases CTGTGCGATAACTGCGCGATAGCCGTGCGGCAGTCGCATGCCCACGGCCCGCGCATCGCTTCCGTTATCGCTCCCGTTAC ACGGATCGCGCCGCCTGCGC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MFQMTRSLRSITVAGALLACAASAFAQADSPVGMWQTIDDHTGKPKALVQISADSNGELSGKVVKGLGENDTPDRRCTAC TDERKDQLIKGMTIIKAMKKDGEGWDGGNILDPENGKVYKCKMKLEDGGQKLVVRGYIGVSLLGRSQTWMRSQ
Sequences:
>Translated_153_residues MFQMTRSLRSITVAGALLACAASAFAQADSPVGMWQTIDDHTGKPKALVQISADSNGELSGKVVKGLGENDTPDRRCTAC TDERKDQLIKGMTIIKAMKKDGEGWDGGNILDPENGKVYKCKMKLEDGGQKLVVRGYIGVSLLGRSQTWMRSQ >Mature_153_residues MFQMTRSLRSITVAGALLACAASAFAQADSPVGMWQTIDDHTGKPKALVQISADSNGELSGKVVKGLGENDTPDRRCTAC TDERKDQLIKGMTIIKAMKKDGEGWDGGNILDPENGKVYKCKMKLEDGGQKLVVRGYIGVSLLGRSQTWMRSQ
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16551; Mature: 16551
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQMTRSLRSITVAGALLACAASAFAQADSPVGMWQTIDDHTGKPKALVQISADSNGELS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCC GKVVKGLGENDTPDRRCTACTDERKDQLIKGMTIIKAMKKDGEGWDGGNILDPENGKVYK CHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE CKMKLEDGGQKLVVRGYIGVSLLGRSQTWMRSQ EEEEECCCCCEEEEEEEECEEEECCCCCCCCCC >Mature Secondary Structure MFQMTRSLRSITVAGALLACAASAFAQADSPVGMWQTIDDHTGKPKALVQISADSNGELS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCC GKVVKGLGENDTPDRRCTACTDERKDQLIKGMTIIKAMKKDGEGWDGGNILDPENGKVYK CHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE CKMKLEDGGQKLVVRGYIGVSLLGRSQTWMRSQ EEEEECCCCCEEEEEEEECEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA