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The map label for this gene is scpB [H]

Identifier: 237812038

GI number: 237812038

Start: 1725614

End: 1726981

Strand: Direct

Name: scpB [H]

Synonym: GBP346_A1780

Alternate gene names: 237812038

Gene position: 1725614-1726981 (Clockwise)

Preceding gene: 237812037

Following gene: 237812039

Centisome position: 42.1

GC content: 70.91

Gene sequence:

>1368_bases
ATGAATACCCAAGAGGCGAAGATCGTCCTCGAGACTGCCTTGATCTGCGCGCAGGAACCGCTGAAGCTCGGCGATTTGCG
CAAGCTCTTTGCCGACGGCGTGTCGGCGGATACAGTCCGAACACTGCTCGAAGATCTGAAACAGGAATGGACCGGACGGG
GGGTCGAACTCGTCGCGCTCGCGTCGGGCTGGCGCTTCCAGAGCAAGCCGGCGATGCGCACGTATCTCGATCGCCTGCAT
CCCGAGAAGCCGCCGAAGTATTCGCGCGCCGTGCTGGAGACGCTCGCGATCATCGCGTACCGGCAGCCGGTCACGCGCGG
CGACATCGAGGAGATCCGCGGCGTCACGGTGAACACGCAGGTCGTCAAGCAGCTCGAGGACCGCGGCTGGATCGAAGTGA
TCGGTCATCGCGACGTGCCGGGCCGTCCGGCGCTCTACGCGACGACAAAACAGTTTCTCGACGACCTCGGCCTGAAGGCG
CTCGACGATCTGCCCGCGCTCGAGGAGCCGGCCGCGCATCTGGAGGCGAGCCTGCTCGCGCAGCAGGCGATCGATTTCCC
CGATGACGCGCGCGGCGACGGCGAAGCGCCTGCCGTCGCGCCCGAGACGGACGCCGCCGCCGCGCAGGCGGGCGAGGTTG
CCGAGCCGGCGAGCGATTCGGTGGTTTTGCGCAACGAAGATACGGCGCGCGCCGACGAGCCGCGGCAGGCGGACGCGGCG
CCGACGCGTGCCGACGAGCCGCGGCAGGAAGGGGCGACGGACGGCTTGGCGGCACGGATCGGCGATCCAGCCGATAATGA
CGCCGGGCGAGCCGATGTGGACGTCGACGCGGCGCCGGCTCTCGGCGAAGCCGATGCGCCGCGCGGCGGCGATGCTTCCG
GGCATGCGGCTCGCGAGATCGACTCGCGCGAGATGACGGAGCCGGCAGACGCCGGCGGCGAGGCGGCCGGCACGACCGCA
TCGCATACGCATGCGGTCGCGCCGTACCATGATGCGCAGAGCGCAGCGGACGCCGTCGCGGCGCCGCACGCCGGCGATGC
AGCCGCTGATGGCGAGCGCGCCGAATCGCCCTCGGGGACGAACGAAAACGCAAACTACGTCGCGCAGCCGGACGCGGAGC
CGGCCGACGCGGCACACGCAGCAACACGCGAGGCGGCCGCCGACCCGGTGGCGGGCCGAGCGACGAAGGAAGACCACGGC
GCGATCGGCGGCATCCCGCACGATGCCGAGCCGGTCCGAGCGCACGCGGAGGAGGCGTTGGACGACACGTCCGACAGTCT
CGCCGACGCCGTGCGCAGTGCAAGCGAGGCGGCCCCCGAGCACGAGCGGCAGGACGACGAGGACGCGCCTGCGAAGCGTC
GCGCCTGA

Upstream 100 bases:

>100_bases
CCATCAATATGACCGATCAGAATCGGGCGAGCGCGTCTTCCGTTCCTTTCGTCTGTTCGATTGATCCGGTTCGCTTGACC
ACAGGGTCTGACCTAGCTGC

Downstream 100 bases:

>100_bases
GACGGGCGGCCGAACCCCAGCCGTGCCCGCGACGGGCGCGAGACCTGACATTTTGAGGTTGTTTTGACTGATACCCACGA
CATCGATTCGTCCGAATCCG

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQEWTGRGVELVALASGWRFQSKPAMRTYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAAHLEASLLAQQAIDFPDDARGDGEAPAVAPETDAAAAQAGEVAEPASDSVVLRNEDTARADEPRQADAA
PTRADEPRQEGATDGLAARIGDPADNDAGRADVDVDAAPALGEADAPRGGDASGHAAREIDSREMTEPADAGGEAAGTTA
SHTHAVAPYHDAQSAADAVAAPHAGDAAADGERAESPSGTNENANYVAQPDAEPADAAHAATREAAADPVAGRATKEDHG
AIGGIPHDAEPVRAHAEEALDDTSDSLADAVRSASEAAPEHERQDDEDAPAKRRA

Sequences:

>Translated_455_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQEWTGRGVELVALASGWRFQSKPAMRTYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAAHLEASLLAQQAIDFPDDARGDGEAPAVAPETDAAAAQAGEVAEPASDSVVLRNEDTARADEPRQADAA
PTRADEPRQEGATDGLAARIGDPADNDAGRADVDVDAAPALGEADAPRGGDASGHAAREIDSREMTEPADAGGEAAGTTA
SHTHAVAPYHDAQSAADAVAAPHAGDAAADGERAESPSGTNENANYVAQPDAEPADAAHAATREAAADPVAGRATKEDHG
AIGGIPHDAEPVRAHAEEALDDTSDSLADAVRSASEAAPEHERQDDEDAPAKRRA
>Mature_455_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQEWTGRGVELVALASGWRFQSKPAMRTYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAAHLEASLLAQQAIDFPDDARGDGEAPAVAPETDAAAAQAGEVAEPASDSVVLRNEDTARADEPRQADAA
PTRADEPRQEGATDGLAARIGDPADNDAGRADVDVDAAPALGEADAPRGGDASGHAAREIDSREMTEPADAGGEAAGTTA
SHTHAVAPYHDAQSAADAVAAPHAGDAAADGERAESPSGTNENANYVAQPDAEPADAAHAATREAAADPVAGRATKEDHG
AIGGIPHDAEPVRAHAEEALDDTSDSLADAVRSASEAAPEHERQDDEDAPAKRRA

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 47695; Mature: 47695

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQEWTGRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ASGWRFQSKPAMRTYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
ECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKALDDLPALEEPAAHLEASLLA
HHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHH
QQAIDFPDDARGDGEAPAVAPETDAAAAQAGEVAEPASDSVVLRNEDTARADEPRQADAA
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
PTRADEPRQEGATDGLAARIGDPADNDAGRADVDVDAAPALGEADAPRGGDASGHAAREI
CCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
DSREMTEPADAGGEAAGTTASHTHAVAPYHDAQSAADAVAAPHAGDAAADGERAESPSGT
CHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
NENANYVAQPDAEPADAAHAATREAAADPVAGRATKEDHGAIGGIPHDAEPVRAHAEEAL
CCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
DDTSDSLADAVRSASEAAPEHERQDDEDAPAKRRA
HCCHHHHHHHHHHHHHCCCCHHCCCCCCCCHHCCC
>Mature Secondary Structure
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQEWTGRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ASGWRFQSKPAMRTYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
ECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKALDDLPALEEPAAHLEASLLA
HHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHH
QQAIDFPDDARGDGEAPAVAPETDAAAAQAGEVAEPASDSVVLRNEDTARADEPRQADAA
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
PTRADEPRQEGATDGLAARIGDPADNDAGRADVDVDAAPALGEADAPRGGDASGHAAREI
CCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
DSREMTEPADAGGEAAGTTASHTHAVAPYHDAQSAADAVAAPHAGDAAADGERAESPSGT
CHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
NENANYVAQPDAEPADAAHAATREAAADPVAGRATKEDHGAIGGIPHDAEPVRAHAEEAL
CCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
DDTSDSLADAVRSASEAAPEHERQDDEDAPAKRRA
HCCHHHHHHHHHHHHHCCCCHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]