| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812033
Identifier: 237812033
GI number: 237812033
Start: 1721611
End: 1722333
Strand: Reverse
Name: 237812033
Synonym: GBP346_A1775
Alternate gene names: NA
Gene position: 1722333-1721611 (Counterclockwise)
Preceding gene: 237812036
Following gene: 237812032
Centisome position: 42.02
GC content: 66.11
Gene sequence:
>723_bases TTGATCCTGTTCAACTCATTTGGACTTCTCTTCGTCGTTTTCCTGCTCTGCCGCAAACGGCGCGGCGCGTTCGCGATACT CGCGGCCGGCGCCGCACTCCTGTGGCTGATCGCTTCCGGATGGCTTGCCGCGCCACTCGTCGCGCTCGCGCAAGCCGGCA TGCAACCGGTCGCGCACCCGACGATGACGGGCGACACCGTGATCGTGATGCTCGGCGCGGGCATCGAACGCCGCGACGGC GTCGCGATACCGCCACGCGACGCACTCGCCCGCATCGACAAGACGGCCGAACTCTATTCGGCATGCCGACGAACGGCGCA GCGCTGCACGGTCGTCGTGTCGGGCGGCGACCCGCAGGTGCGCGGCATCGCGGAAGCGGACACCTATGCGCCCTATCTGC TCGCGCGAGGCGTCGCGAGCGCCGACCTGATCCGCGAGAAGCGCAGCCACACCACCTATGAAAACGCGCGCTTCACTGCT CCCATATTACGCGCCCAACATTACGATGATCTGATTCTCGTCACCTCGTCATATCAGATGAAACGCGCGCTCCTCGATTT CGAGCGGTTCGGATTCGCGCCGCAGCCCGTCTACGCGAACCGCAGGGACGCCCGGCCCGGCTGGCTGCCGCGCGCGGCCA ATCTCGCCAACGCCGAGCTGGCGCTGCACGAAATCGTCGGCGTCGCGCAATTTCATGTGTACCGCCGCCTCGGCTGGTTC TAG
Upstream 100 bases:
>100_bases ATCCCTCCACTCCTTCCGACCCGCGCCGTGACGCTTCGTTCTCGCCTCACGGGGACAGATCATTAACCGCTCCACAAAAA GCTACCTTACCCCAATCAAA
Downstream 100 bases:
>100_bases CCGCACCGCTTCGCCCGCGCCGGATCGTCGCGGCGCCGATGCCGCCGGCGCGTTGCGGTCGCGCAAATGGCGCAGCAACG ACGGATTGCGCCACTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQPVAHPTMTGDTVIVMLGAGIERRDG VAIPPRDALARIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTA PILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARPGWLPRAANLANAELALHEIVGVAQFHVYRRLGWF
Sequences:
>Translated_240_residues MILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQPVAHPTMTGDTVIVMLGAGIERRDG VAIPPRDALARIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTA PILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARPGWLPRAANLANAELALHEIVGVAQFHVYRRLGWF >Mature_240_residues MILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQPVAHPTMTGDTVIVMLGAGIERRDG VAIPPRDALARIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTA PILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARPGWLPRAANLANAELALHEIVGVAQFHVYRRLGWF
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26422; Mature: 26422
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQPVAHP CEEECHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC TMTGDTVIVMLGAGIERRDGVAIPPRDALARIDKTAELYSACRRTAQRCTVVVSGGDPQV CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC RGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVTSSYQM CEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCEEEEECCHHH KRALLDFERFGFAPQPVYANRRDARPGWLPRAANLANAELALHEIVGVAQFHVYRRLGWF HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQPVAHP CEEECHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC TMTGDTVIVMLGAGIERRDGVAIPPRDALARIDKTAELYSACRRTAQRCTVVVSGGDPQV CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC RGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVTSSYQM CEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCEEEEECCHHH KRALLDFERFGFAPQPVYANRRDARPGWLPRAANLANAELALHEIVGVAQFHVYRRLGWF HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA