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The map label for this gene is yoaB [C]

Identifier: 237812013

GI number: 237812013

Start: 1700941

End: 1701294

Strand: Direct

Name: yoaB [C]

Synonym: GBP346_A1753

Alternate gene names: 237812013

Gene position: 1700941-1701294 (Clockwise)

Preceding gene: 237812012

Following gene: 237812014

Centisome position: 41.5

GC content: 66.1

Gene sequence:

>354_bases
ATGGCAGTTACTCGTCATCACGTCGGTCCCCGTCTTTCCGAAATCGCGATTCACAACGGCACCGTCTATCTCGCGGGCCA
GATCGCCGAGGACACGGCGCAGGACATCAAGGGCCAGACGCGCGAAGTGCTCGCCCACGTCGATCGCCTGCTCGCCGAGG
CGAACAGCGACAAGGCGCACCTGCTGTCGGTGCAGATCTTCATCTCCGACATGGCGAACTTCCCGGGCATGAACGAAGTG
TGGGACGCATGGGTGGCCCACGGCGCAACGCCGCCGCGCGCGACCGTCGAGGCGAAGCTCGCGAACCCCGCTTGCCTCGT
CGAGGTGGTGGTGGTCGCCGCGCAACGCGGCTGA

Upstream 100 bases:

>100_bases
GTCGGAGACGCGCCGCACGCGTCATAATATGCGGTTCGGCGCCGCACGCTCGAACGCGTGCGGCGCCGTCCACCGATCAA
CCATTCAACCGGGAATTCTC

Downstream 100 bases:

>100_bases
GCCGGCGCGCGCACGTTTTTTCAGGCAACTGGCCATACCCGACGATGACAGCCGATTCCGCTTCCACCGCTGCGGCGCCG
TCGCTCGACGACGTGCTCGC

Product: endoribonuclease L-PSP family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHVDRLLAEANSDKAHLLSVQIFISDMANFPGMNEV
WDAWVAHGATPPRATVEAKLANPACLVEVVVVAAQRG

Sequences:

>Translated_117_residues
MAVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHVDRLLAEANSDKAHLLSVQIFISDMANFPGMNEV
WDAWVAHGATPPRATVEAKLANPACLVEVVVVAAQRG
>Mature_116_residues
AVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHVDRLLAEANSDKAHLLSVQIFISDMANFPGMNEVW
DAWVAHGATPPRATVEAKLANPACLVEVVVVAAQRG

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=40.3508771929825, Blast_Score=90, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12570; Mature: 12439

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHVDRLLAEANSDKAH
CCCCCCCCCCCHHHEEEECCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCH
LLSVQIFISDMANFPGMNEVWDAWVAHGATPPRATVEAKLANPACLVEVVVVAAQRG
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHVDRLLAEANSDKAH
CCCCCCCCCCHHHEEEECCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCH
LLSVQIFISDMANFPGMNEVWDAWVAHGATPPRATVEAKLANPACLVEVVVVAAQRG
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA